Cluster: PUL0179_HRGMv2_0156_C1
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate: beta-mannan
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_00577
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3290 | 4252655 | 4253551 | + | EamA | EamA |
| TF | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3291 | 4253548 | 4257540 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3292 | 4257777 | 4258217 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3293 | 4258250 | 4258690 | + | NULL(UNKNOWN) |
| TC | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3294 | 4258746 | 4261991 | + | 1.B.14.6.1 |
| pfam | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3295 | 4262015 | 4263811 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3296 | 4263845 | 4265017 | + | TIG | SGBP_B_XBD |
| peptidase | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3297 | 4265059 | 4265874 | + | S09.UNW |
| CAZyme | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3298 | 4266114 | 4267313 | + | GH26 |
| CAZyme | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3299 | 4267349 | 4268419 | + | GH26 |
| CAZyme | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3300 | 4268438 | 4269616 | + | GH130_1 |
| TC | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3301 | 4269613 | 4270980 | + | 2.A.2.3.6 |
| CAZyme | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3302 | 4270988 | 4272271 | + | CE7 |
| pfam | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3303 | 4272285 | 4273475 | + | GlcNAc_2-epim |
| pfam | PUL0179_HRGMv2_0156_C1 | HRGMv2_0156_1_3304 | 4273503 | 4274342 | + | Lipase_GDSL | Lipase_GDSL_2 |
Gene ID: HRGMv2_0156_1_3290
Type: pfam
Location: 4252655 - 4253551 (+)
Type: pfam
Location: 4252655 - 4253551 (+)
Gene ID: HRGMv2_0156_1_3291
Type: TF
Location: 4253548 - 4257540 (-)
Type: TF
Location: 4253548 - 4257540 (-)
Gene ID: HRGMv2_0156_1_3292
Type: null
Location: 4257777 - 4258217 (+)
Type: null
Location: 4257777 - 4258217 (+)
Gene ID: HRGMv2_0156_1_3293
Type: null
Location: 4258250 - 4258690 (+)
Type: null
Location: 4258250 - 4258690 (+)
Gene ID: HRGMv2_0156_1_3294
Type: TC
Location: 4258746 - 4261991 (+)
Type: TC
Location: 4258746 - 4261991 (+)
Gene ID: HRGMv2_0156_1_3295
Type: pfam
Location: 4262015 - 4263811 (+)
Type: pfam
Location: 4262015 - 4263811 (+)
Gene ID: HRGMv2_0156_1_3296
Type: pfam
Location: 4263845 - 4265017 (+)
Type: pfam
Location: 4263845 - 4265017 (+)
Gene ID: HRGMv2_0156_1_3297
Type: peptidase
Location: 4265059 - 4265874 (+)
Type: peptidase
Location: 4265059 - 4265874 (+)
Gene ID: HRGMv2_0156_1_3298
Type: CAZyme
Location: 4266114 - 4267313 (+)
Type: CAZyme
Location: 4266114 - 4267313 (+)
Gene ID: HRGMv2_0156_1_3299
Type: CAZyme
Location: 4267349 - 4268419 (+)
Type: CAZyme
Location: 4267349 - 4268419 (+)
Gene ID: HRGMv2_0156_1_3300
Type: CAZyme
Location: 4268438 - 4269616 (+)
Type: CAZyme
Location: 4268438 - 4269616 (+)
Gene ID: HRGMv2_0156_1_3301
Type: TC
Location: 4269613 - 4270980 (+)
Type: TC
Location: 4269613 - 4270980 (+)
Gene ID: HRGMv2_0156_1_3302
Type: CAZyme
Location: 4270988 - 4272271 (+)
Type: CAZyme
Location: 4270988 - 4272271 (+)
Gene ID: HRGMv2_0156_1_3303
Type: pfam
Location: 4272285 - 4273475 (+)
Type: pfam
Location: 4272285 - 4273475 (+)
Gene ID: HRGMv2_0156_1_3304
Type: pfam
Location: 4273503 - 4274342 (+)
Type: pfam
Location: 4273503 - 4274342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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