Cluster: PUL0155
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: alginate
- Genome ID: PUL0155
- CGC Family ID: CGCFAM_06389
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | AE007870 | Atu3019 | 1 | 537 | - | NULL(UNKNOWN) |
| TF | AE007870 | Atu3020 | 969 | 1679 | + | GntR |
| TC | AE007870 | Atu3021 | 1710 | 2825 | + | 3.A.1.1.10 |
| TC | AE007870 | Atu3022 | 2822 | 3751 | + | 3.A.1.1.10 |
| TC | AE007870 | Atu3023 | 3763 | 4644 | + | 3.A.1.1.10 |
| TC | AE007870 | Atu3024 | 4705 | 6234 | + | 3.A.1.1.10 |
| CAZyme | AE007870 | Atu3025 | 6306 | 8636 | + | PL15_1 |
| pfam | AE007870 | Atu3026 | 8652 | 9401 | + | adh_short | KR | adh_short_C2 | SDR |
Gene ID: Atu3019
Type: null
Location: 1 - 537 (-)
Type: null
Location: 1 - 537 (-)
Gene ID: Atu3020
Type: TF
Location: 969 - 1679 (+)
Type: TF
Location: 969 - 1679 (+)
Gene ID: Atu3021
Type: TC
Location: 1710 - 2825 (+)
Type: TC
Location: 1710 - 2825 (+)
Gene ID: Atu3022
Type: TC
Location: 2822 - 3751 (+)
Type: TC
Location: 2822 - 3751 (+)
Gene ID: Atu3023
Type: TC
Location: 3763 - 4644 (+)
Type: TC
Location: 3763 - 4644 (+)
Gene ID: Atu3024
Type: TC
Location: 4705 - 6234 (+)
Type: TC
Location: 4705 - 6234 (+)
Gene ID: Atu3025
Type: CAZyme
Location: 6306 - 8636 (+)
Type: CAZyme
Location: 6306 - 8636 (+)
Gene ID: Atu3026
Type: pfam
Location: 8652 - 9401 (+)
Type: pfam
Location: 8652 - 9401 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Species
Agrobacterium fabrum
Gene Composition
Loading chart...
← Back to Cluster List