Cluster: PUL0152
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: alginate
- Genome ID: PUL0152
- CGC Family ID: CGCFAM_00331
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CP000388 | Patl_3654 | 1 | 1386 | - | 3.D.2.2.1 |
| TC | CP000388 | Patl_3655 | 1399 | 1680 | - | 3.D.2.2.1 |
| TC | CP000388 | Patl_3656 | 1680 | 2849 | - | 3.D.2.2.1 |
| STP | CP000388 | Patl_3657 | 3005 | 3928 | - | PfkB |
| TC | CP000388 | Patl_3658 | 3993 | 5291 | - | 2.A.1.14.25 |
| CAZyme | CP000388 | Patl_3659 | 5349 | 7613 | - | PL6 | PL6_1 |
| TF | CP000388 | Patl_3660 | 8137 | 8874 | + | GntR |
| pfam | CP000388 | Patl_3661 | 8972 | 9718 | - | adh_short | KR | adh_short_C2 | SDR |
Gene ID: Patl_3654
Type: TC
Location: 1 - 1386 (-)
Type: TC
Location: 1 - 1386 (-)
Gene ID: Patl_3655
Type: TC
Location: 1399 - 1680 (-)
Type: TC
Location: 1399 - 1680 (-)
Gene ID: Patl_3656
Type: TC
Location: 1680 - 2849 (-)
Type: TC
Location: 1680 - 2849 (-)
Gene ID: Patl_3657
Type: STP
Location: 3005 - 3928 (-)
Type: STP
Location: 3005 - 3928 (-)
Gene ID: Patl_3658
Type: TC
Location: 3993 - 5291 (-)
Type: TC
Location: 3993 - 5291 (-)
Gene ID: Patl_3659
Type: CAZyme
Location: 5349 - 7613 (-)
Type: CAZyme
Location: 5349 - 7613 (-)
Gene ID: Patl_3660
Type: TF
Location: 8137 - 8874 (+)
Type: TF
Location: 8137 - 8874 (+)
Gene ID: Patl_3661
Type: pfam
Location: 8972 - 9718 (-)
Type: pfam
Location: 8972 - 9718 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Species
Pseudoalteromonas atlantica
Gene Composition
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