Cluster: PUL0147
🧬 Cluster Details
- Gene Count: 30
- CAZyme Count: 6
- Substrate: galactan
- Genome ID: PUL0147
- CGC Family ID: CGCFAM_06443
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_LT965930 | PCAR9_RS20140 | 1 | 2436 | + | GH167 |
| CAZyme | NZ_LT965930 | PCAR9_RS20145 | 2652 | 3209 | + | GH16_17 |
| sulfatase | NZ_LT965930 | PCAR9_RS20150 | 3457 | 4980 | + | S1_81 |
| sulfatase | NZ_LT965930 | PCAR9_RS20155 | 5050 | 6492 | + | S1_19 |
| sulfatase | NZ_LT965930 | PCAR9_RS20160 | 6518 | 8389 | + | S1_7 |
| pfam | NZ_LT965930 | PCAR9_RS20165 | 8484 | 9614 | + | SGL | Lactonase | SSL_N |
| pfam | NZ_LT965930 | PCAR9_RS20170 | 10189 | 13899 | + | TonB_dep_Rec_b-barrel | Plug |
| pfam | NZ_LT965930 | PCAR9_RS20175 | 13962 | 15749 | + | Big_2 |
| CAZyme | NZ_LT965930 | PCAR9_RS20180 | 15852 | 17486 | + | GH82 |
| CAZyme | NZ_LT965930 | PCAR9_RS20185 | 17647 | 18597 | + | GH16_13 |
| sulfatase | NZ_LT965930 | PCAR9_RS20190 | 18735 | 20528 | + | S1_7 |
| sulfatase | NZ_LT965930 | PCAR9_RS20195 | 20607 | 23147 | - | S1_31 |
| sulfatase | NZ_LT965930 | PCAR9_RS20205 | 25972 | 27393 | + | S1_19 |
| pfam | NZ_LT965930 | PCAR9_RS20210 | 27414 | 28577 | + | MR_MLE_N | MR_MLE_C |
| pfam | NZ_LT965930 | PCAR9_RS20215 | 28595 | 29470 | + | SGL |
| TC | NZ_LT965930 | PCAR9_RS20220 | 29671 | 31242 | + | 2.A.1.1.55 |
| pfam | NZ_LT965930 | PCAR9_RS20225 | 31254 | 32033 | + | adh_short | Epimerase | KR | adh_short_C2 |
| pfam | NZ_LT965930 | PCAR9_RS20230 | 32080 | 33018 | + | Aldose_epim |
| pfam | NZ_LT965930 | PCAR9_RS20235 | 33143 | 34570 | + | Aldedh |
| pfam | NZ_LT965930 | PCAR9_RS20240 | 34581 | 35744 | + | MR_MLE_N | MR_MLE_C |
| pfam | NZ_LT965930 | PCAR9_RS20245 | 35762 | 36769 | + | DGOK |
| pfam | NZ_LT965930 | PCAR9_RS20250 | 36760 | 37380 | + | Aldolase |
| TF | NZ_LT965930 | PCAR9_RS20255 | 37465 | 38157 | - | GntR |
| TF | NZ_LT965930 | PCAR9_RS20260 | 38268 | 39005 | - | GntR |
| TC | NZ_LT965930 | PCAR9_RS20265 | 39176 | 42016 | - | 1.B.14.12.2 |
| TF | NZ_LT965930 | PCAR9_RS20270 | 42277 | 43485 | + | HTH_AraC | HTH_AraC |
| CAZyme | NZ_LT965930 | PCAR9_RS20275 | 43725 | 44918 | + | GH16_17 |
| NULL(UNKNOWN) | NZ_LT965930 | PCAR9_RS20280 | 44993 | 45958 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | NZ_LT965930 | PCAR9_RS20285 | 46064 | 46828 | + | NULL(UNKNOWN) |
| CAZyme | NZ_LT965930 | PCAR9_RS20290 | 47423 | 50251 | + | GH150 |
Gene ID: PCAR9_RS20140
Type: CAZyme
Location: 1 - 2436 (+)
Type: CAZyme
Location: 1 - 2436 (+)
Gene ID: PCAR9_RS20145
Type: CAZyme
Location: 2652 - 3209 (+)
Type: CAZyme
Location: 2652 - 3209 (+)
Gene ID: PCAR9_RS20150
Type: sulfatase
Location: 3457 - 4980 (+)
Type: sulfatase
Location: 3457 - 4980 (+)
Gene ID: PCAR9_RS20155
Type: sulfatase
Location: 5050 - 6492 (+)
Type: sulfatase
Location: 5050 - 6492 (+)
Gene ID: PCAR9_RS20160
Type: sulfatase
Location: 6518 - 8389 (+)
Type: sulfatase
Location: 6518 - 8389 (+)
Gene ID: PCAR9_RS20165
Type: pfam
Location: 8484 - 9614 (+)
Type: pfam
Location: 8484 - 9614 (+)
Gene ID: PCAR9_RS20170
Type: pfam
Location: 10189 - 13899 (+)
Type: pfam
Location: 10189 - 13899 (+)
Gene ID: PCAR9_RS20175
Type: pfam
Location: 13962 - 15749 (+)
Type: pfam
Location: 13962 - 15749 (+)
Gene ID: PCAR9_RS20180
Type: CAZyme
Location: 15852 - 17486 (+)
Type: CAZyme
Location: 15852 - 17486 (+)
Gene ID: PCAR9_RS20185
Type: CAZyme
Location: 17647 - 18597 (+)
Type: CAZyme
Location: 17647 - 18597 (+)
Gene ID: PCAR9_RS20190
Type: sulfatase
Location: 18735 - 20528 (+)
Type: sulfatase
Location: 18735 - 20528 (+)
Gene ID: PCAR9_RS20195
Type: sulfatase
Location: 20607 - 23147 (-)
Type: sulfatase
Location: 20607 - 23147 (-)
Gene ID: PCAR9_RS20205
Type: sulfatase
Location: 25972 - 27393 (+)
Type: sulfatase
Location: 25972 - 27393 (+)
Gene ID: PCAR9_RS20210
Type: pfam
Location: 27414 - 28577 (+)
Type: pfam
Location: 27414 - 28577 (+)
Gene ID: PCAR9_RS20215
Type: pfam
Location: 28595 - 29470 (+)
Type: pfam
Location: 28595 - 29470 (+)
Gene ID: PCAR9_RS20220
Type: TC
Location: 29671 - 31242 (+)
Type: TC
Location: 29671 - 31242 (+)
Gene ID: PCAR9_RS20225
Type: pfam
Location: 31254 - 32033 (+)
Type: pfam
Location: 31254 - 32033 (+)
Gene ID: PCAR9_RS20230
Type: pfam
Location: 32080 - 33018 (+)
Type: pfam
Location: 32080 - 33018 (+)
Gene ID: PCAR9_RS20235
Type: pfam
Location: 33143 - 34570 (+)
Type: pfam
Location: 33143 - 34570 (+)
Gene ID: PCAR9_RS20240
Type: pfam
Location: 34581 - 35744 (+)
Type: pfam
Location: 34581 - 35744 (+)
Gene ID: PCAR9_RS20245
Type: pfam
Location: 35762 - 36769 (+)
Type: pfam
Location: 35762 - 36769 (+)
Gene ID: PCAR9_RS20250
Type: pfam
Location: 36760 - 37380 (+)
Type: pfam
Location: 36760 - 37380 (+)
Gene ID: PCAR9_RS20255
Type: TF
Location: 37465 - 38157 (-)
Type: TF
Location: 37465 - 38157 (-)
Gene ID: PCAR9_RS20260
Type: TF
Location: 38268 - 39005 (-)
Type: TF
Location: 38268 - 39005 (-)
Gene ID: PCAR9_RS20265
Type: TC
Location: 39176 - 42016 (-)
Type: TC
Location: 39176 - 42016 (-)
Gene ID: PCAR9_RS20270
Type: TF
Location: 42277 - 43485 (+)
Type: TF
Location: 42277 - 43485 (+)
Gene ID: PCAR9_RS20275
Type: CAZyme
Location: 43725 - 44918 (+)
Type: CAZyme
Location: 43725 - 44918 (+)
Gene ID: PCAR9_RS20280
Type: null
Location: 44993 - 45958 (+)
Type: null
Location: 44993 - 45958 (+)
Gene ID: PCAR9_RS20285
Type: null
Location: 46064 - 46828 (+)
Type: null
Location: 46064 - 46828 (+)
Gene ID: PCAR9_RS20290
Type: CAZyme
Location: 47423 - 50251 (+)
Type: CAZyme
Location: 47423 - 50251 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Species
Pseudoalteromonas carrageenovora
Gene Composition
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