Cluster: PUL0146
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 3
- Substrate: galactan
- Genome ID: PUL0146
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CP000388 | Patl_0879 | 1 | 2625 | + | GH82 |
| CAZyme | CP000388 | Patl_0880 | 2827 | 3828 | + | GH16_13 |
| sulfatase | CP000388 | Patl_0881 | 3851 | 5383 | + | S1_16 |
| NULL(UNKNOWN) | CP000388 | Patl_0882 | 5853 | 6314 | + | NULL(UNKNOWN) |
| pfam | CP000388 | Patl_0883 | 6619 | 6882 | + | YrhK |
| sulfatase | CP000388 | Patl_0884 | 7012 | 7791 | - | S1_8 |
| CAZyme | CP000388 | Patl_0885 | 7984 | 10410 | - | GH167 |
| pfam | CP000388 | Patl_0886 | 10510 | 12258 | - | Big_2 |
| TC | CP000388 | Patl_0887 | 12365 | 16075 | - | 1.B.14.12.1 |
| sulfatase | CP000388 | Patl_0888 | 17251 | 18804 | + | S1_81 |
| sulfatase | CP000388 | Patl_0889 | 18880 | 20382 | + | S1_19 |
| sulfatase | CP000388 | Patl_0890 | 20530 | 22470 | + | S1_7 |
| sulfatase | CP000388 | Patl_0891 | 22636 | 24333 | + | S1_7 |
| pfam | CP000388 | Patl_0892 | 24330 | 26255 | + | FAD_binding_2 | GIDA | DAO | FAD_oxidored | NAD_binding_8 |
| NULL(UNKNOWN) | CP000388 | Patl_0893 | 26255 | 27520 | + | NULL(UNKNOWN) |
| TF | CP000388 | Patl_0894 | 27927 | 28688 | + | GntR |
| sulfatase | CP000388 | Patl_0895 | 28742 | 30157 | + | S1_19 |
| pfam | CP000388 | Patl_0896 | 30572 | 32014 | + | Aldedh |
| pfam | CP000388 | Patl_0897 | 32014 | 33177 | + | MR_MLE_N | MR_MLE_C |
| pfam | CP000388 | Patl_0898 | 33183 | 34244 | + | DGOK |
| pfam | CP000388 | Patl_0899 | 34311 | 34961 | + | Aldolase |
| TC | CP000388 | Patl_0900 | 35092 | 36648 | + | 2.A.1.1.55 |
| TF | CP000388 | Patl_0901 | 36807 | 37547 | + | GntR |
Gene ID: Patl_0879
Type: CAZyme
Location: 1 - 2625 (+)
Type: CAZyme
Location: 1 - 2625 (+)
Gene ID: Patl_0880
Type: CAZyme
Location: 2827 - 3828 (+)
Type: CAZyme
Location: 2827 - 3828 (+)
Gene ID: Patl_0881
Type: sulfatase
Location: 3851 - 5383 (+)
Type: sulfatase
Location: 3851 - 5383 (+)
Gene ID: Patl_0882
Type: null
Location: 5853 - 6314 (+)
Type: null
Location: 5853 - 6314 (+)
Gene ID: Patl_0883
Type: pfam
Location: 6619 - 6882 (+)
Type: pfam
Location: 6619 - 6882 (+)
Gene ID: Patl_0884
Type: sulfatase
Location: 7012 - 7791 (-)
Type: sulfatase
Location: 7012 - 7791 (-)
Gene ID: Patl_0885
Type: CAZyme
Location: 7984 - 10410 (-)
Type: CAZyme
Location: 7984 - 10410 (-)
Gene ID: Patl_0886
Type: pfam
Location: 10510 - 12258 (-)
Type: pfam
Location: 10510 - 12258 (-)
Gene ID: Patl_0887
Type: TC
Location: 12365 - 16075 (-)
Type: TC
Location: 12365 - 16075 (-)
Gene ID: Patl_0888
Type: sulfatase
Location: 17251 - 18804 (+)
Type: sulfatase
Location: 17251 - 18804 (+)
Gene ID: Patl_0889
Type: sulfatase
Location: 18880 - 20382 (+)
Type: sulfatase
Location: 18880 - 20382 (+)
Gene ID: Patl_0890
Type: sulfatase
Location: 20530 - 22470 (+)
Type: sulfatase
Location: 20530 - 22470 (+)
Gene ID: Patl_0891
Type: sulfatase
Location: 22636 - 24333 (+)
Type: sulfatase
Location: 22636 - 24333 (+)
Gene ID: Patl_0892
Type: pfam
Location: 24330 - 26255 (+)
Type: pfam
Location: 24330 - 26255 (+)
Gene ID: Patl_0893
Type: null
Location: 26255 - 27520 (+)
Type: null
Location: 26255 - 27520 (+)
Gene ID: Patl_0894
Type: TF
Location: 27927 - 28688 (+)
Type: TF
Location: 27927 - 28688 (+)
Gene ID: Patl_0895
Type: sulfatase
Location: 28742 - 30157 (+)
Type: sulfatase
Location: 28742 - 30157 (+)
Gene ID: Patl_0896
Type: pfam
Location: 30572 - 32014 (+)
Type: pfam
Location: 30572 - 32014 (+)
Gene ID: Patl_0897
Type: pfam
Location: 32014 - 33177 (+)
Type: pfam
Location: 32014 - 33177 (+)
Gene ID: Patl_0898
Type: pfam
Location: 33183 - 34244 (+)
Type: pfam
Location: 33183 - 34244 (+)
Gene ID: Patl_0899
Type: pfam
Location: 34311 - 34961 (+)
Type: pfam
Location: 34311 - 34961 (+)
Gene ID: Patl_0900
Type: TC
Location: 35092 - 36648 (+)
Type: TC
Location: 35092 - 36648 (+)
Gene ID: Patl_0901
Type: TF
Location: 36807 - 37547 (+)
Type: TF
Location: 36807 - 37547 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Species
Pseudoalteromonas atlantica
Gene Composition
Loading chart...
← Back to Cluster List