Cluster: PUL0140_A72.CMAG_1_C0
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate: xylan
- Genome ID: A72.CMAG_1
- CGC Family ID: CGCFAM_01492
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_536 | 681041 | 682393 | + | AP_endonuc_2 |
| CAZyme | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_537 | 682798 | 684480 | + | GH43_12 |
| TF | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_538 | 684493 | 685497 | - | LacI |
| STP | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_539 | 685828 | 687105 | + | SBP_bac_1 |
| TC | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_540 | 687214 | 688272 | + | 3.A.1.1.7 |
| TC | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_541 | 688274 | 689143 | + | 3.A.1.1.18 |
| CAZyme | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_542 | 689221 | 690846 | + | CBM91 | GH43_11 |
| CAZyme | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_543 | 690952 | 692877 | + | CE20 | CE20 |
| peptidase | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_544 | 693114 | 694277 | + | S09.UPW |
| CAZyme | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_545 | 694290 | 695849 | - | CBM91 | GH43_10 |
| pfam | PUL0140_A72.CMAG_1_C0 | A72_contig_1503_546 | 695939 | 697468 | - | FGGY_N | FGGY_C |
Gene ID: A72_contig_1503_536
Type: pfam
Location: 681041 - 682393 (+)
Type: pfam
Location: 681041 - 682393 (+)
Gene ID: A72_contig_1503_537
Type: CAZyme
Location: 682798 - 684480 (+)
Type: CAZyme
Location: 682798 - 684480 (+)
Gene ID: A72_contig_1503_538
Type: TF
Location: 684493 - 685497 (-)
Type: TF
Location: 684493 - 685497 (-)
Gene ID: A72_contig_1503_539
Type: STP
Location: 685828 - 687105 (+)
Type: STP
Location: 685828 - 687105 (+)
Gene ID: A72_contig_1503_540
Type: TC
Location: 687214 - 688272 (+)
Type: TC
Location: 687214 - 688272 (+)
Gene ID: A72_contig_1503_541
Type: TC
Location: 688274 - 689143 (+)
Type: TC
Location: 688274 - 689143 (+)
Gene ID: A72_contig_1503_542
Type: CAZyme
Location: 689221 - 690846 (+)
Type: CAZyme
Location: 689221 - 690846 (+)
Gene ID: A72_contig_1503_543
Type: CAZyme
Location: 690952 - 692877 (+)
Type: CAZyme
Location: 690952 - 692877 (+)
Gene ID: A72_contig_1503_544
Type: peptidase
Location: 693114 - 694277 (+)
Type: peptidase
Location: 693114 - 694277 (+)
Gene ID: A72_contig_1503_545
Type: CAZyme
Location: 694290 - 695849 (-)
Type: CAZyme
Location: 694290 - 695849 (-)
Gene ID: A72_contig_1503_546
Type: pfam
Location: 695939 - 697468 (-)
Type: pfam
Location: 695939 - 697468 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium animalis
Gene Composition
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