Cluster: PUL0140
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate: xylan
- Genome ID: PUL0140
- CGC Family ID: CGCFAM_01492
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | CP028460 | CNCMI4602_0516 | 1 | 1353 | + | AP_endonuc_2 |
| CAZyme | CP028460 | CNCMI4602_0517 | 1783 | 3465 | + | GH43_12 |
| TF | CP028460 | CNCMI4602_0518 | 3630 | 4646 | - | LacI |
| STP | CP028460 | CNCMI4602_0519 | 4978 | 6255 | + | SBP_bac_1 |
| TC | CP028460 | CNCMI4602_0520 | 6363 | 7421 | + | 3.A.1.1.25 |
| TC | CP028460 | CNCMI4602_0521 | 7423 | 8292 | + | 3.A.1.1.18 |
| CAZyme | CP028460 | CNCMI4602_0522 | 8370 | 9995 | + | CBM91 | GH43_11 |
| CAZyme | CP028460 | CNCMI4602_0523 | 9998 | 12028 | + | CE20 | CE20 |
| peptidase | CP028460 | CNCMI4602_0524 | 12265 | 13428 | + | S09.UPW |
| CAZyme | CP028460 | CNCMI4602_0525 | 13441 | 15000 | - | CBM91 | GH43_10 |
| pfam | CP028460 | CNCMI4602_0526 | 15090 | 16619 | - | FGGY_N | FGGY_C |
Gene ID: CNCMI4602_0516
Type: pfam
Location: 1 - 1353 (+)
Type: pfam
Location: 1 - 1353 (+)
Gene ID: CNCMI4602_0517
Type: CAZyme
Location: 1783 - 3465 (+)
Type: CAZyme
Location: 1783 - 3465 (+)
Gene ID: CNCMI4602_0518
Type: TF
Location: 3630 - 4646 (-)
Type: TF
Location: 3630 - 4646 (-)
Gene ID: CNCMI4602_0519
Type: STP
Location: 4978 - 6255 (+)
Type: STP
Location: 4978 - 6255 (+)
Gene ID: CNCMI4602_0520
Type: TC
Location: 6363 - 7421 (+)
Type: TC
Location: 6363 - 7421 (+)
Gene ID: CNCMI4602_0521
Type: TC
Location: 7423 - 8292 (+)
Type: TC
Location: 7423 - 8292 (+)
Gene ID: CNCMI4602_0522
Type: CAZyme
Location: 8370 - 9995 (+)
Type: CAZyme
Location: 8370 - 9995 (+)
Gene ID: CNCMI4602_0523
Type: CAZyme
Location: 9998 - 12028 (+)
Type: CAZyme
Location: 9998 - 12028 (+)
Gene ID: CNCMI4602_0524
Type: peptidase
Location: 12265 - 13428 (+)
Type: peptidase
Location: 12265 - 13428 (+)
Gene ID: CNCMI4602_0525
Type: CAZyme
Location: 13441 - 15000 (-)
Type: CAZyme
Location: 13441 - 15000 (-)
Gene ID: CNCMI4602_0526
Type: pfam
Location: 15090 - 16619 (-)
Type: pfam
Location: 15090 - 16619 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium animalis
Gene Composition
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