Cluster: PUL0139
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate: arabinogalactan
- Genome ID: PUL0139
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CP028460 | CNCMI4602_0058 | 1 | 1242 | - | 3.A.1.2.22 |
| TC | CP028460 | CNCMI4602_0059 | 1239 | 2795 | - | 3.A.1.2.22 |
| TC | CP028460 | CNCMI4602_0060 | 2825 | 4000 | - | 3.A.1.2.22 |
| TF | CP028460 | CNCMI4602_0061 | 4217 | 4825 | + | MarR |
| pfam | CP028460 | CNCMI4602_0062 | 4771 | 5427 | + | ROK |
| TC | CP028460 | CNCMI4602_0063 | 5467 | 6318 | + | 3.A.1.2.24 |
| NULL(UNKNOWN) | CP028460 | CNCMI4602_0064 | 6535 | 6876 | + | NULL(UNKNOWN) |
| TF | CP028460 | CNCMI4602_0065 | 6871 | 7905 | - | LacI |
| CAZyme | CP028460 | CNCMI4602_0066 | 8023 | 9564 | - | GH51_1 |
| pfam | CP028460 | CNCMI4602_0067 | 9901 | 11514 | + | FGGY_N | FGGY_C |
| pfam | CP028460 | CNCMI4602_0068 | 11570 | 12262 | + | Aldolase_II |
| pfam | CP028460 | CNCMI4602_0069 | 12518 | 14035 | + | AraA_N | Arabinose_Iso_C | AraA_central |
Gene ID: CNCMI4602_0058
Type: TC
Location: 1 - 1242 (-)
Type: TC
Location: 1 - 1242 (-)
Gene ID: CNCMI4602_0059
Type: TC
Location: 1239 - 2795 (-)
Type: TC
Location: 1239 - 2795 (-)
Gene ID: CNCMI4602_0060
Type: TC
Location: 2825 - 4000 (-)
Type: TC
Location: 2825 - 4000 (-)
Gene ID: CNCMI4602_0061
Type: TF
Location: 4217 - 4825 (+)
Type: TF
Location: 4217 - 4825 (+)
Gene ID: CNCMI4602_0062
Type: pfam
Location: 4771 - 5427 (+)
Type: pfam
Location: 4771 - 5427 (+)
Gene ID: CNCMI4602_0063
Type: TC
Location: 5467 - 6318 (+)
Type: TC
Location: 5467 - 6318 (+)
Gene ID: CNCMI4602_0064
Type: null
Location: 6535 - 6876 (+)
Type: null
Location: 6535 - 6876 (+)
Gene ID: CNCMI4602_0065
Type: TF
Location: 6871 - 7905 (-)
Type: TF
Location: 6871 - 7905 (-)
Gene ID: CNCMI4602_0066
Type: CAZyme
Location: 8023 - 9564 (-)
Type: CAZyme
Location: 8023 - 9564 (-)
Gene ID: CNCMI4602_0067
Type: pfam
Location: 9901 - 11514 (+)
Type: pfam
Location: 9901 - 11514 (+)
Gene ID: CNCMI4602_0068
Type: pfam
Location: 11570 - 12262 (+)
Type: pfam
Location: 11570 - 12262 (+)
Gene ID: CNCMI4602_0069
Type: pfam
Location: 12518 - 14035 (+)
Type: pfam
Location: 12518 - 14035 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium animalis
Gene Composition
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