Cluster: PUL0127
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate: alginate
- Genome ID: PUL0127
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | LR136958 | ALT761_03413 | 1 | 732 | + | GntR |
| CAZyme | LR136958 | ALT761_03414 | 974 | 2437 | + | CBM32 | PL7_5 |
| NULL(UNKNOWN) | LR136958 | ALT761_03415 | 2543 | 3484 | - | NULL(UNKNOWN) |
| TC | LR136958 | ALT761_03416 | 3725 | 6757 | - | 1.B.14.12.1 |
| CAZyme | LR136958 | ALT761_03417 | 6809 | 9526 | - | PL6_3 |
| CAZyme | LR136958 | ALT761_03418 | 9971 | 10972 | - | PL7_5 |
| TC | LR136958 | ALT761_03419 | 11021 | 12316 | - | 2.A.1.14.25 |
| CAZyme | LR136958 | ALT761_03420 | 12392 | 14713 | - | PL6 | PL6_1 |
| pfam | LR136958 | ALT761_03421 | 15128 | 15874 | - | adh_short | KR | adh_short_C2 | SDR |
| pfam | LR136958 | ALT761_03422 | 16646 | 17524 | + | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | NAD_binding_11 |
| pfam | LR136958 | ALT761_03423 | 17945 | 18289 | + | AraC_binding | Cupin_2 |
| TC | LR136958 | ALT761_03424 | 18294 | 19601 | + | 2.A.1.14.25 |
Gene ID: ALT761_03413
Type: TF
Location: 1 - 732 (+)
Type: TF
Location: 1 - 732 (+)
Gene ID: ALT761_03414
Type: CAZyme
Location: 974 - 2437 (+)
Type: CAZyme
Location: 974 - 2437 (+)
Gene ID: ALT761_03415
Type: null
Location: 2543 - 3484 (-)
Type: null
Location: 2543 - 3484 (-)
Gene ID: ALT761_03416
Type: TC
Location: 3725 - 6757 (-)
Type: TC
Location: 3725 - 6757 (-)
Gene ID: ALT761_03417
Type: CAZyme
Location: 6809 - 9526 (-)
Type: CAZyme
Location: 6809 - 9526 (-)
Gene ID: ALT761_03418
Type: CAZyme
Location: 9971 - 10972 (-)
Type: CAZyme
Location: 9971 - 10972 (-)
Gene ID: ALT761_03419
Type: TC
Location: 11021 - 12316 (-)
Type: TC
Location: 11021 - 12316 (-)
Gene ID: ALT761_03420
Type: CAZyme
Location: 12392 - 14713 (-)
Type: CAZyme
Location: 12392 - 14713 (-)
Gene ID: ALT761_03421
Type: pfam
Location: 15128 - 15874 (-)
Type: pfam
Location: 15128 - 15874 (-)
Gene ID: ALT761_03422
Type: pfam
Location: 16646 - 17524 (+)
Type: pfam
Location: 16646 - 17524 (+)
Gene ID: ALT761_03423
Type: pfam
Location: 17945 - 18289 (+)
Type: pfam
Location: 17945 - 18289 (+)
Gene ID: ALT761_03424
Type: TC
Location: 18294 - 19601 (+)
Type: TC
Location: 18294 - 19601 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Alteromonadaceae
Genus
Alteromonas
Species
Alteromonas sp. 76-1
Gene Composition
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