Cluster: PUL0112_Rep_527_C1
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: Rep_527
- CGC Family ID: CGCFAM_01249
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0112_Rep_527_C1 | Rep_527_c_0_3013 | 3537266 | 3540265 | + | GH2 |
| CAZyme | PUL0112_Rep_527_C1 | Rep_527_c_0_3014 | 3540339 | 3542777 | - | GH2 |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3015 | 3542918 | 3545752 | + | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2 |
| TC | PUL0112_Rep_527_C1 | Rep_527_c_0_3016 | 3545774 | 3546718 | + | 2.A.115.1.2 |
| CAZyme | PUL0112_Rep_527_C1 | Rep_527_c_0_3017 | 3546857 | 3549409 | + | GH2 |
| sulfatase | PUL0112_Rep_527_C1 | Rep_527_c_0_3020 | 3551925 | 3552509 | + | S1_7 |
| TC | PUL0112_Rep_527_C1 | Rep_527_c_0_3021 | 3552641 | 3555766 | + | 1.B.14.6.1 |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3022 | 3555781 | 3557271 | + | SusD_RagB | SusD-like_3 |
| TF | PUL0112_Rep_527_C1 | Rep_527_c_0_3023 | 3557268 | 3558236 | - | Trans_reg_C |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3024 | 3558261 | 3558911 | - | CAT |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3025 | 3558908 | 3559819 | - | ApbA | F420_oxidored | ApbA_C |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3026 | 3559886 | 3560989 | - | MMR_HSR1 | FeoB_N | YchF-GTPase_C |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3027 | 3561192 | 3561578 | - | DUF3836 |
| sulfatase | PUL0112_Rep_527_C1 | Rep_527_c_0_3028 | 3561732 | 3564500 | - | S1_2 |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3029 | 3564595 | 3565569 | + | polyprenyl_synt |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3030 | 3565636 | 3566577 | - | DeoC |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3031 | 3566583 | 3566903 | - | PRA-PH | MazG |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3032 | 3566906 | 3567358 | - | Tyr_Deacylase |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3033 | 3567392 | 3569224 | - | GIY-YIG | UvrC_RNaseH_dom | HHH_5 | UvrC_RNaseH |
| STP | PUL0112_Rep_527_C1 | Rep_527_c_0_3034 | 3569330 | 3569854 | - | Pribosyltran |
| TC | PUL0112_Rep_527_C1 | Rep_527_c_0_3035 | 3569912 | 3571783 | - | 1.C.39.4.5 |
| pfam | PUL0112_Rep_527_C1 | Rep_527_c_0_3036 | 3571821 | 3572243 | - | YbeY |
| TC | PUL0112_Rep_527_C1 | Rep_527_c_0_3037 | 3572252 | 3573484 | - | 9.B.156.3.1 |
Gene ID: Rep_527_c_0_3013
Type: CAZyme
Location: 3537266 - 3540265 (+)
Type: CAZyme
Location: 3537266 - 3540265 (+)
Gene ID: Rep_527_c_0_3014
Type: CAZyme
Location: 3540339 - 3542777 (-)
Type: CAZyme
Location: 3540339 - 3542777 (-)
Gene ID: Rep_527_c_0_3015
Type: pfam
Location: 3542918 - 3545752 (+)
Type: pfam
Location: 3542918 - 3545752 (+)
Gene ID: Rep_527_c_0_3016
Type: TC
Location: 3545774 - 3546718 (+)
Type: TC
Location: 3545774 - 3546718 (+)
Gene ID: Rep_527_c_0_3017
Type: CAZyme
Location: 3546857 - 3549409 (+)
Type: CAZyme
Location: 3546857 - 3549409 (+)
Gene ID: Rep_527_c_0_3020
Type: sulfatase
Location: 3551925 - 3552509 (+)
Type: sulfatase
Location: 3551925 - 3552509 (+)
Gene ID: Rep_527_c_0_3021
Type: TC
Location: 3552641 - 3555766 (+)
Type: TC
Location: 3552641 - 3555766 (+)
Gene ID: Rep_527_c_0_3022
Type: pfam
Location: 3555781 - 3557271 (+)
Type: pfam
Location: 3555781 - 3557271 (+)
Gene ID: Rep_527_c_0_3023
Type: TF
Location: 3557268 - 3558236 (-)
Type: TF
Location: 3557268 - 3558236 (-)
Gene ID: Rep_527_c_0_3024
Type: pfam
Location: 3558261 - 3558911 (-)
Type: pfam
Location: 3558261 - 3558911 (-)
Gene ID: Rep_527_c_0_3025
Type: pfam
Location: 3558908 - 3559819 (-)
Type: pfam
Location: 3558908 - 3559819 (-)
Gene ID: Rep_527_c_0_3026
Type: pfam
Location: 3559886 - 3560989 (-)
Type: pfam
Location: 3559886 - 3560989 (-)
Gene ID: Rep_527_c_0_3027
Type: pfam
Location: 3561192 - 3561578 (-)
Type: pfam
Location: 3561192 - 3561578 (-)
Gene ID: Rep_527_c_0_3028
Type: sulfatase
Location: 3561732 - 3564500 (-)
Type: sulfatase
Location: 3561732 - 3564500 (-)
Gene ID: Rep_527_c_0_3029
Type: pfam
Location: 3564595 - 3565569 (+)
Type: pfam
Location: 3564595 - 3565569 (+)
Gene ID: Rep_527_c_0_3030
Type: pfam
Location: 3565636 - 3566577 (-)
Type: pfam
Location: 3565636 - 3566577 (-)
Gene ID: Rep_527_c_0_3031
Type: pfam
Location: 3566583 - 3566903 (-)
Type: pfam
Location: 3566583 - 3566903 (-)
Gene ID: Rep_527_c_0_3032
Type: pfam
Location: 3566906 - 3567358 (-)
Type: pfam
Location: 3566906 - 3567358 (-)
Gene ID: Rep_527_c_0_3033
Type: pfam
Location: 3567392 - 3569224 (-)
Type: pfam
Location: 3567392 - 3569224 (-)
Gene ID: Rep_527_c_0_3034
Type: STP
Location: 3569330 - 3569854 (-)
Type: STP
Location: 3569330 - 3569854 (-)
Gene ID: Rep_527_c_0_3035
Type: TC
Location: 3569912 - 3571783 (-)
Type: TC
Location: 3569912 - 3571783 (-)
Gene ID: Rep_527_c_0_3036
Type: pfam
Location: 3571821 - 3572243 (-)
Type: pfam
Location: 3571821 - 3572243 (-)
Gene ID: Rep_527_c_0_3037
Type: TC
Location: 3572252 - 3573484 (-)
Type: TC
Location: 3572252 - 3573484 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Composition
Loading chart...
← Back to Cluster List