Cluster: PUL0110
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: PUL0110
- CGC Family ID: CGCFAM_04133
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | LR131280.1 | VDS02539.1 | 36 | 686 | + | NULL(UNKNOWN) |
| pfam | LR131280.1 | VDS02540.1 | 933 | 1412 | + | HU-HIG |
| NULL(UNKNOWN) | LR131280.1 | VDS02541.1 | 1404 | 1517 | - | NULL(UNKNOWN) |
| pfam | LR131280.1 | VDS02542.1 | 1539 | 1766 | + | DUF4248 |
| pfam | LR131280.1 | VDS02543.1 | 1900 | 2352 | + | DUF4890 |
| pfam | LR131280.1 | VDS02544.1 | 2414 | 2962 | + | DUF4738 |
| TF | LR131280.1 | VDS02545.1 | 3012 | 3689 | + | Trans_reg_C |
| STP | LR131280.1 | VDS02546.1 | 3686 | 4975 | + | HisKA |
| pfam | LR131280.1 | VDS02547.1 | 5068 | 5508 | + | PepSY_like |
| pfam | LR131280.1 | VDS02548.1 | 5545 | 6048 | + | PepSY_like |
| pfam | LR131280.1 | VDS02549.1 | 6136 | 7347 | - | SDH_alpha | SDH_beta | SDH_beta |
| pfam | LR131280.1 | VDS02550.1 | 7404 | 9941 | - | MutS_V | Smr | MSSS |
| pfam | LR131280.1 | VDS02551.1 | 11541 | 14270 | + | Viral_helicase1 | Viral_helicase1 | AAA_19 | UvrD_C_2 | AAA_30 |
| pfam | LR131280.1 | VDS02552.1 | 14318 | 14656 | - | DDE_Tnp_1_3 |
| NULL(UNKNOWN) | LR131280.1 | VDS02553.1 | 14814 | 14933 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LR131280.1 | VDS02554.1 | 15093 | 15383 | + | NULL(UNKNOWN) |
| pfam | LR131280.1 | VDS02555.1 | 15787 | 16311 | + | Flavodoxin_4 |
| peptidase | LR131280.1 | VDS02556.1 | 16308 | 17417 | + | S09.UNW |
| pfam | LR131280.1 | VDS02557.1 | 17424 | 18479 | - | AlkZ-like |
| pfam | LR131280.1 | VDS02558.1 | 18791 | 19813 | + | NPCBM_assoc | NPCBM_assoc |
| TC | LR131280.1 | VDS02559.1 | 19810 | 20559 | + | 3.A.1.132.8 |
| pfam | LR131280.1 | VDS02560.1 | 20552 | 21508 | + | ABC2_membrane_2 |
| NULL(UNKNOWN) | LR131280.1 | VDS02561.1 | 21880 | 22032 | - | NULL(UNKNOWN) |
| CAZyme | LR131280.1 | VDS02562.1 | 22186 | 24708 | + | GH2 |
| TC | LR131280.1 | VDS02563.1 | 24755 | 27868 | - | 2.A.21.9.2 |
| pfam | LR131280.1 | VDS02564.1 | 28049 | 28753 | - | NigD_N | NigD_C |
| STP | LR131280.1 | VDS02565.1 | 28935 | 29483 | + | Sigma70_r2 | Sigma70_r4_2 |
| pfam | LR131280.1 | VDS02566.1 | 29484 | 30809 | + | OMP_b-brl_2 |
Gene ID: VDS02539.1
Type: null
Location: 36 - 686 (+)
Type: null
Location: 36 - 686 (+)
Gene ID: VDS02540.1
Type: pfam
Location: 933 - 1412 (+)
Type: pfam
Location: 933 - 1412 (+)
Gene ID: VDS02541.1
Type: null
Location: 1404 - 1517 (-)
Type: null
Location: 1404 - 1517 (-)
Gene ID: VDS02542.1
Type: pfam
Location: 1539 - 1766 (+)
Type: pfam
Location: 1539 - 1766 (+)
Gene ID: VDS02543.1
Type: pfam
Location: 1900 - 2352 (+)
Type: pfam
Location: 1900 - 2352 (+)
Gene ID: VDS02544.1
Type: pfam
Location: 2414 - 2962 (+)
Type: pfam
Location: 2414 - 2962 (+)
Gene ID: VDS02545.1
Type: TF
Location: 3012 - 3689 (+)
Type: TF
Location: 3012 - 3689 (+)
Gene ID: VDS02546.1
Type: STP
Location: 3686 - 4975 (+)
Type: STP
Location: 3686 - 4975 (+)
Gene ID: VDS02547.1
Type: pfam
Location: 5068 - 5508 (+)
Type: pfam
Location: 5068 - 5508 (+)
Gene ID: VDS02548.1
Type: pfam
Location: 5545 - 6048 (+)
Type: pfam
Location: 5545 - 6048 (+)
Gene ID: VDS02549.1
Type: pfam
Location: 6136 - 7347 (-)
Type: pfam
Location: 6136 - 7347 (-)
Gene ID: VDS02550.1
Type: pfam
Location: 7404 - 9941 (-)
Type: pfam
Location: 7404 - 9941 (-)
Gene ID: VDS02551.1
Type: pfam
Location: 11541 - 14270 (+)
Type: pfam
Location: 11541 - 14270 (+)
Gene ID: VDS02552.1
Type: pfam
Location: 14318 - 14656 (-)
Type: pfam
Location: 14318 - 14656 (-)
Gene ID: VDS02553.1
Type: null
Location: 14814 - 14933 (+)
Type: null
Location: 14814 - 14933 (+)
Gene ID: VDS02554.1
Type: null
Location: 15093 - 15383 (+)
Type: null
Location: 15093 - 15383 (+)
Gene ID: VDS02555.1
Type: pfam
Location: 15787 - 16311 (+)
Type: pfam
Location: 15787 - 16311 (+)
Gene ID: VDS02556.1
Type: peptidase
Location: 16308 - 17417 (+)
Type: peptidase
Location: 16308 - 17417 (+)
Gene ID: VDS02557.1
Type: pfam
Location: 17424 - 18479 (-)
Type: pfam
Location: 17424 - 18479 (-)
Gene ID: VDS02558.1
Type: pfam
Location: 18791 - 19813 (+)
Type: pfam
Location: 18791 - 19813 (+)
Gene ID: VDS02559.1
Type: TC
Location: 19810 - 20559 (+)
Type: TC
Location: 19810 - 20559 (+)
Gene ID: VDS02560.1
Type: pfam
Location: 20552 - 21508 (+)
Type: pfam
Location: 20552 - 21508 (+)
Gene ID: VDS02561.1
Type: null
Location: 21880 - 22032 (-)
Type: null
Location: 21880 - 22032 (-)
Gene ID: VDS02562.1
Type: CAZyme
Location: 22186 - 24708 (+)
Type: CAZyme
Location: 22186 - 24708 (+)
Gene ID: VDS02563.1
Type: TC
Location: 24755 - 27868 (-)
Type: TC
Location: 24755 - 27868 (-)
Gene ID: VDS02564.1
Type: pfam
Location: 28049 - 28753 (-)
Type: pfam
Location: 28049 - 28753 (-)
Gene ID: VDS02565.1
Type: STP
Location: 28935 - 29483 (+)
Type: STP
Location: 28935 - 29483 (+)
Gene ID: VDS02566.1
Type: pfam
Location: 29484 - 30809 (+)
Type: pfam
Location: 29484 - 30809 (+)
Taxonomic Lineage
Gene Composition
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