Cluster: PUL0109
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: PUL0109
- CGC Family ID: CGCFAM_04133
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | LR131277.1 | VDS02462.1 | 27 | 173 | + | NULL(UNKNOWN) |
| pfam | LR131277.1 | VDS02463.1 | 178 | 2442 | + | PDDEXK_7 | DUF2357 |
| pfam | LR131277.1 | VDS02464.1 | 2689 | 3168 | + | HU-HIG |
| NULL(UNKNOWN) | LR131277.1 | VDS02465.1 | 3160 | 3273 | - | NULL(UNKNOWN) |
| pfam | LR131277.1 | VDS02466.1 | 3295 | 3522 | + | DUF4248 |
| pfam | LR131277.1 | VDS02467.1 | 3656 | 4108 | + | DUF4890 |
| pfam | LR131277.1 | VDS02468.1 | 4170 | 4718 | + | DUF4738 |
| TF | LR131277.1 | VDS02469.1 | 4768 | 5445 | + | Trans_reg_C |
| STP | LR131277.1 | VDS02470.1 | 5442 | 6731 | + | HisKA |
| pfam | LR131277.1 | VDS02471.1 | 6824 | 7264 | + | PepSY_like |
| pfam | LR131277.1 | VDS02472.1 | 7304 | 7804 | + | PepSY_like |
| pfam | LR131277.1 | VDS02473.1 | 7892 | 9103 | - | SDH_alpha | SDH_beta | SDH_beta |
| pfam | LR131277.1 | VDS02474.1 | 9160 | 11697 | - | MutS_V | Smr | MSSS |
| pfam | LR131277.1 | VDS02475.1 | 13297 | 16026 | + | Viral_helicase1 | Viral_helicase1 | AAA_19 | UvrD_C_2 | AAA_30 |
| pfam | LR131277.1 | VDS02476.1 | 16074 | 16412 | - | DDE_Tnp_1_3 |
| NULL(UNKNOWN) | LR131277.1 | VDS02477.1 | 16570 | 16689 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LR131277.1 | VDS02478.1 | 16849 | 17139 | + | NULL(UNKNOWN) |
| pfam | LR131277.1 | VDS02479.1 | 17531 | 18067 | + | Flavodoxin_4 |
| peptidase | LR131277.1 | VDS02480.1 | 18064 | 19173 | + | S09.UNW |
| pfam | LR131277.1 | VDS02481.1 | 19180 | 20235 | - | AlkZ-like |
| pfam | LR131277.1 | VDS02482.1 | 20547 | 21569 | + | NPCBM_assoc | NPCBM_assoc |
| TC | LR131277.1 | VDS02483.1 | 21572 | 22315 | + | 3.A.1.132.8 |
| pfam | LR131277.1 | VDS02484.1 | 22308 | 23264 | + | ABC2_membrane_2 |
| CAZyme | LR131277.1 | VDS02485.1 | 23927 | 26464 | + | GH2 |
| TC | LR131277.1 | VDS02486.1 | 26511 | 29624 | - | 2.A.21.9.2 |
| pfam | LR131277.1 | VDS02487.1 | 29805 | 30509 | - | NigD_N | NigD_C |
| STP | LR131277.1 | VDS02488.1 | 30691 | 31239 | + | Sigma70_r2 | Sigma70_r4_2 |
| pfam | LR131277.1 | VDS02489.1 | 31240 | 32565 | + | OMP_b-brl_2 |
Gene ID: VDS02462.1
Type: null
Location: 27 - 173 (+)
Type: null
Location: 27 - 173 (+)
Gene ID: VDS02463.1
Type: pfam
Location: 178 - 2442 (+)
Type: pfam
Location: 178 - 2442 (+)
Gene ID: VDS02464.1
Type: pfam
Location: 2689 - 3168 (+)
Type: pfam
Location: 2689 - 3168 (+)
Gene ID: VDS02465.1
Type: null
Location: 3160 - 3273 (-)
Type: null
Location: 3160 - 3273 (-)
Gene ID: VDS02466.1
Type: pfam
Location: 3295 - 3522 (+)
Type: pfam
Location: 3295 - 3522 (+)
Gene ID: VDS02467.1
Type: pfam
Location: 3656 - 4108 (+)
Type: pfam
Location: 3656 - 4108 (+)
Gene ID: VDS02468.1
Type: pfam
Location: 4170 - 4718 (+)
Type: pfam
Location: 4170 - 4718 (+)
Gene ID: VDS02469.1
Type: TF
Location: 4768 - 5445 (+)
Type: TF
Location: 4768 - 5445 (+)
Gene ID: VDS02470.1
Type: STP
Location: 5442 - 6731 (+)
Type: STP
Location: 5442 - 6731 (+)
Gene ID: VDS02471.1
Type: pfam
Location: 6824 - 7264 (+)
Type: pfam
Location: 6824 - 7264 (+)
Gene ID: VDS02472.1
Type: pfam
Location: 7304 - 7804 (+)
Type: pfam
Location: 7304 - 7804 (+)
Gene ID: VDS02473.1
Type: pfam
Location: 7892 - 9103 (-)
Type: pfam
Location: 7892 - 9103 (-)
Gene ID: VDS02474.1
Type: pfam
Location: 9160 - 11697 (-)
Type: pfam
Location: 9160 - 11697 (-)
Gene ID: VDS02475.1
Type: pfam
Location: 13297 - 16026 (+)
Type: pfam
Location: 13297 - 16026 (+)
Gene ID: VDS02476.1
Type: pfam
Location: 16074 - 16412 (-)
Type: pfam
Location: 16074 - 16412 (-)
Gene ID: VDS02477.1
Type: null
Location: 16570 - 16689 (+)
Type: null
Location: 16570 - 16689 (+)
Gene ID: VDS02478.1
Type: null
Location: 16849 - 17139 (+)
Type: null
Location: 16849 - 17139 (+)
Gene ID: VDS02479.1
Type: pfam
Location: 17531 - 18067 (+)
Type: pfam
Location: 17531 - 18067 (+)
Gene ID: VDS02480.1
Type: peptidase
Location: 18064 - 19173 (+)
Type: peptidase
Location: 18064 - 19173 (+)
Gene ID: VDS02481.1
Type: pfam
Location: 19180 - 20235 (-)
Type: pfam
Location: 19180 - 20235 (-)
Gene ID: VDS02482.1
Type: pfam
Location: 20547 - 21569 (+)
Type: pfam
Location: 20547 - 21569 (+)
Gene ID: VDS02483.1
Type: TC
Location: 21572 - 22315 (+)
Type: TC
Location: 21572 - 22315 (+)
Gene ID: VDS02484.1
Type: pfam
Location: 22308 - 23264 (+)
Type: pfam
Location: 22308 - 23264 (+)
Gene ID: VDS02485.1
Type: CAZyme
Location: 23927 - 26464 (+)
Type: CAZyme
Location: 23927 - 26464 (+)
Gene ID: VDS02486.1
Type: TC
Location: 26511 - 29624 (-)
Type: TC
Location: 26511 - 29624 (-)
Gene ID: VDS02487.1
Type: pfam
Location: 29805 - 30509 (-)
Type: pfam
Location: 29805 - 30509 (-)
Gene ID: VDS02488.1
Type: STP
Location: 30691 - 31239 (+)
Type: STP
Location: 30691 - 31239 (+)
Gene ID: VDS02489.1
Type: pfam
Location: 31240 - 32565 (+)
Type: pfam
Location: 31240 - 32565 (+)
Taxonomic Lineage
Gene Composition
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