Cluster: PUL0104
🧬 Cluster Details
- Gene Count: 33
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: PUL0104
- CGC Family ID: CGCFAM_01071
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | LR131283.1 | VDS02615.1 | 180 | 3533 | - | 1.B.14.6.1 |
| TF | LR131283.1 | VDS02616.1 | 3763 | 4179 | + | HTH_11 |
| pfam | LR131283.1 | VDS02617.1 | 4236 | 4772 | + | DDE_3 |
| CAZyme | LR131283.1 | VDS02618.1 | 4996 | 6618 | - | CBM93 | GH33 |
| pfam | LR131283.1 | VDS02619.1 | 6634 | 7017 | - | DUF386 |
| TC | LR131283.1 | VDS02620.1 | 7100 | 8338 | - | 2.A.1.32.1 |
| pfam | LR131283.1 | VDS02621.1 | 8377 | 9561 | - | GlcNAc_2-epim |
| pfam | LR131283.1 | VDS02622.1 | 9572 | 10489 | - | DHDPS |
| pfam | LR131283.1 | VDS02623.1 | 10581 | 11444 | - | Kelch_6 | NANM |
| TF | LR131283.1 | VDS02624.1 | 11961 | 13169 | + | MarR |
| TF | LR131283.1 | VDS02625.1 | 13232 | 13441 | - | HTH_3 |
| NULL(UNKNOWN) | LR131283.1 | VDS02626.1 | 13448 | 13690 | - | NULL(UNKNOWN) |
| pfam | LR131283.1 | VDS02627.1 | 13705 | 14157 | - | DUF2975 |
| pfam | LR131283.1 | VDS02628.1 | 14169 | 14816 | - | DUF2975 |
| pfam | LR131283.1 | VDS02629.1 | 14833 | 15405 | - | DUF2975 |
| TC | LR131283.1 | VDS02630.1 | 15434 | 16303 | - | 9.B.2.1.5 |
| pfam | LR131283.1 | VDS02631.1 | 16329 | 16649 | - | DUF3836 |
| CAZyme | LR131283.1 | VDS02632.1 | 17184 | 20600 | + | CBM67 | GH78 |
| TF | LR131283.1 | VDS02633.1 | 20681 | 21574 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | LR131283.1 | VDS02634.1 | 21549 | 21710 | - | NULL(UNKNOWN) |
| pfam | LR131283.1 | VDS02635.1 | 21737 | 23215 | + | FGGY_N | FGGY_C |
| pfam | LR131283.1 | VDS02636.1 | 23222 | 24475 | + | RhaA |
| TC | LR131283.1 | VDS02637.1 | 24541 | 25551 | + | 2.A.7.6.1 |
| pfam | LR131283.1 | VDS02638.1 | 25578 | 26387 | + | Aldolase_II |
| pfam | LR131283.1 | VDS02639.1 | 26420 | 27574 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| NULL(UNKNOWN) | LR131283.1 | VDS02640.1 | 27795 | 28700 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LR131283.1 | VDS02641.1 | 28789 | 28920 | + | NULL(UNKNOWN) |
| pfam | LR131283.1 | VDS02642.1 | 29000 | 31150 | - | S1 | RNB | OB_RNB | OB_Dis3 | CSD2 |
| TC | LR131283.1 | VDS02643.1 | 31299 | 32201 | + | 2.A.4.7.2 |
| pfam | LR131283.1 | VDS02644.1 | 32206 | 33216 | + | adh_short | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| pfam | LR131283.1 | VDS02645.1 | 33207 | 34187 | + | PAP2 | PAP2_3 |
| pfam | LR131283.1 | VDS02646.1 | 34202 | 35209 | - | Dus |
| peptidase | LR131283.1 | VDS02647.1 | 35277 | 36548 | + | U32.001 |
Gene ID: VDS02615.1
Type: TC
Location: 180 - 3533 (-)
Type: TC
Location: 180 - 3533 (-)
Gene ID: VDS02616.1
Type: TF
Location: 3763 - 4179 (+)
Type: TF
Location: 3763 - 4179 (+)
Gene ID: VDS02617.1
Type: pfam
Location: 4236 - 4772 (+)
Type: pfam
Location: 4236 - 4772 (+)
Gene ID: VDS02618.1
Type: CAZyme
Location: 4996 - 6618 (-)
Type: CAZyme
Location: 4996 - 6618 (-)
Gene ID: VDS02619.1
Type: pfam
Location: 6634 - 7017 (-)
Type: pfam
Location: 6634 - 7017 (-)
Gene ID: VDS02620.1
Type: TC
Location: 7100 - 8338 (-)
Type: TC
Location: 7100 - 8338 (-)
Gene ID: VDS02621.1
Type: pfam
Location: 8377 - 9561 (-)
Type: pfam
Location: 8377 - 9561 (-)
Gene ID: VDS02622.1
Type: pfam
Location: 9572 - 10489 (-)
Type: pfam
Location: 9572 - 10489 (-)
Gene ID: VDS02623.1
Type: pfam
Location: 10581 - 11444 (-)
Type: pfam
Location: 10581 - 11444 (-)
Gene ID: VDS02624.1
Type: TF
Location: 11961 - 13169 (+)
Type: TF
Location: 11961 - 13169 (+)
Gene ID: VDS02625.1
Type: TF
Location: 13232 - 13441 (-)
Type: TF
Location: 13232 - 13441 (-)
Gene ID: VDS02626.1
Type: null
Location: 13448 - 13690 (-)
Type: null
Location: 13448 - 13690 (-)
Gene ID: VDS02627.1
Type: pfam
Location: 13705 - 14157 (-)
Type: pfam
Location: 13705 - 14157 (-)
Gene ID: VDS02628.1
Type: pfam
Location: 14169 - 14816 (-)
Type: pfam
Location: 14169 - 14816 (-)
Gene ID: VDS02629.1
Type: pfam
Location: 14833 - 15405 (-)
Type: pfam
Location: 14833 - 15405 (-)
Gene ID: VDS02630.1
Type: TC
Location: 15434 - 16303 (-)
Type: TC
Location: 15434 - 16303 (-)
Gene ID: VDS02631.1
Type: pfam
Location: 16329 - 16649 (-)
Type: pfam
Location: 16329 - 16649 (-)
Gene ID: VDS02632.1
Type: CAZyme
Location: 17184 - 20600 (+)
Type: CAZyme
Location: 17184 - 20600 (+)
Gene ID: VDS02633.1
Type: TF
Location: 20681 - 21574 (-)
Type: TF
Location: 20681 - 21574 (-)
Gene ID: VDS02634.1
Type: null
Location: 21549 - 21710 (-)
Type: null
Location: 21549 - 21710 (-)
Gene ID: VDS02635.1
Type: pfam
Location: 21737 - 23215 (+)
Type: pfam
Location: 21737 - 23215 (+)
Gene ID: VDS02636.1
Type: pfam
Location: 23222 - 24475 (+)
Type: pfam
Location: 23222 - 24475 (+)
Gene ID: VDS02637.1
Type: TC
Location: 24541 - 25551 (+)
Type: TC
Location: 24541 - 25551 (+)
Gene ID: VDS02638.1
Type: pfam
Location: 25578 - 26387 (+)
Type: pfam
Location: 25578 - 26387 (+)
Gene ID: VDS02639.1
Type: pfam
Location: 26420 - 27574 (+)
Type: pfam
Location: 26420 - 27574 (+)
Gene ID: VDS02640.1
Type: null
Location: 27795 - 28700 (-)
Type: null
Location: 27795 - 28700 (-)
Gene ID: VDS02641.1
Type: null
Location: 28789 - 28920 (+)
Type: null
Location: 28789 - 28920 (+)
Gene ID: VDS02642.1
Type: pfam
Location: 29000 - 31150 (-)
Type: pfam
Location: 29000 - 31150 (-)
Gene ID: VDS02643.1
Type: TC
Location: 31299 - 32201 (+)
Type: TC
Location: 31299 - 32201 (+)
Gene ID: VDS02644.1
Type: pfam
Location: 32206 - 33216 (+)
Type: pfam
Location: 32206 - 33216 (+)
Gene ID: VDS02645.1
Type: pfam
Location: 33207 - 34187 (+)
Type: pfam
Location: 33207 - 34187 (+)
Gene ID: VDS02646.1
Type: pfam
Location: 34202 - 35209 (-)
Type: pfam
Location: 34202 - 35209 (-)
Gene ID: VDS02647.1
Type: peptidase
Location: 35277 - 36548 (+)
Type: peptidase
Location: 35277 - 36548 (+)
Taxonomic Lineage
Gene Composition
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