Cluster: PUL0102
🧬 Cluster Details
- Gene Count: 25
- CAZyme Count: 6
- Substrate: host glycan
- Genome ID: PUL0102
- CGC Family ID: CGCFAM_04172
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | LR131274.1 | VDS02385.1 | 621 | 2141 | - | UPF0020 | THUMP | RlmL_1st |
| CAZyme | LR131274.1 | VDS02386.1 | 2441 | 4516 | - | CE20 |
| CAZyme | LR131274.1 | VDS02387.1 | 4518 | 5180 | - | CE3 |
| CAZyme | LR131274.1 | VDS02388.1 | 5208 | 7217 | - | GH20 |
| CAZyme | LR131274.1 | VDS02389.1 | 7226 | 8704 | - | GH29 |
| TC | LR131274.1 | VDS02390.1 | 8801 | 10357 | - | 8.A.46.1.4 |
| TC | LR131274.1 | VDS02391.1 | 10371 | 13736 | - | 1.B.14.6.1 |
| CAZyme | LR131274.1 | VDS02392.1 | 14079 | 15671 | - | CBM93 | GH33 |
| pfam | LR131274.1 | VDS02393.1 | 15717 | 16163 | - | DUF386 |
| TC | LR131274.1 | VDS02394.1 | 16183 | 17421 | - | 2.A.1.32.1 |
| pfam | LR131274.1 | VDS02395.1 | 17460 | 18644 | - | GlcNAc_2-epim |
| pfam | LR131274.1 | VDS02396.1 | 18655 | 19572 | - | DHDPS |
| pfam | LR131274.1 | VDS02397.1 | 19664 | 20746 | - | Kelch_6 | Kelch_KLHDC2_KLHL20_DRC7 | NANM |
| TF | LR131274.1 | VDS02398.1 | 21046 | 22254 | + | MarR |
| TF | LR131274.1 | VDS02399.1 | 22317 | 22526 | - | HTH_3 |
| NULL(UNKNOWN) | LR131274.1 | VDS02400.1 | 22533 | 22787 | - | NULL(UNKNOWN) |
| pfam | LR131274.1 | VDS02401.1 | 22790 | 23128 | - | DUF2975 |
| pfam | LR131274.1 | VDS02402.1 | 23254 | 23901 | - | DUF2975 |
| pfam | LR131274.1 | VDS02403.1 | 23918 | 24532 | - | DUF2975 |
| TC | LR131274.1 | VDS02404.1 | 24519 | 25388 | - | 9.B.2.1.5 |
| pfam | LR131274.1 | VDS02405.1 | 25414 | 25734 | - | DUF3836 |
| CAZyme | LR131274.1 | VDS02406.1 | 26245 | 29685 | + | CBM67 | GH78 |
| TF | LR131274.1 | VDS02407.1 | 29766 | 30659 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | LR131274.1 | VDS02408.1 | 30634 | 30795 | - | NULL(UNKNOWN) |
| pfam | LR131274.1 | VDS02409.1 | 30822 | 32300 | + | FGGY_N | FGGY_C |
Gene ID: VDS02385.1
Type: pfam
Location: 621 - 2141 (-)
Type: pfam
Location: 621 - 2141 (-)
Gene ID: VDS02386.1
Type: CAZyme
Location: 2441 - 4516 (-)
Type: CAZyme
Location: 2441 - 4516 (-)
Gene ID: VDS02387.1
Type: CAZyme
Location: 4518 - 5180 (-)
Type: CAZyme
Location: 4518 - 5180 (-)
Gene ID: VDS02388.1
Type: CAZyme
Location: 5208 - 7217 (-)
Type: CAZyme
Location: 5208 - 7217 (-)
Gene ID: VDS02389.1
Type: CAZyme
Location: 7226 - 8704 (-)
Type: CAZyme
Location: 7226 - 8704 (-)
Gene ID: VDS02390.1
Type: TC
Location: 8801 - 10357 (-)
Type: TC
Location: 8801 - 10357 (-)
Gene ID: VDS02391.1
Type: TC
Location: 10371 - 13736 (-)
Type: TC
Location: 10371 - 13736 (-)
Gene ID: VDS02392.1
Type: CAZyme
Location: 14079 - 15671 (-)
Type: CAZyme
Location: 14079 - 15671 (-)
Gene ID: VDS02393.1
Type: pfam
Location: 15717 - 16163 (-)
Type: pfam
Location: 15717 - 16163 (-)
Gene ID: VDS02394.1
Type: TC
Location: 16183 - 17421 (-)
Type: TC
Location: 16183 - 17421 (-)
Gene ID: VDS02395.1
Type: pfam
Location: 17460 - 18644 (-)
Type: pfam
Location: 17460 - 18644 (-)
Gene ID: VDS02396.1
Type: pfam
Location: 18655 - 19572 (-)
Type: pfam
Location: 18655 - 19572 (-)
Gene ID: VDS02397.1
Type: pfam
Location: 19664 - 20746 (-)
Type: pfam
Location: 19664 - 20746 (-)
Gene ID: VDS02398.1
Type: TF
Location: 21046 - 22254 (+)
Type: TF
Location: 21046 - 22254 (+)
Gene ID: VDS02399.1
Type: TF
Location: 22317 - 22526 (-)
Type: TF
Location: 22317 - 22526 (-)
Gene ID: VDS02400.1
Type: null
Location: 22533 - 22787 (-)
Type: null
Location: 22533 - 22787 (-)
Gene ID: VDS02401.1
Type: pfam
Location: 22790 - 23128 (-)
Type: pfam
Location: 22790 - 23128 (-)
Gene ID: VDS02402.1
Type: pfam
Location: 23254 - 23901 (-)
Type: pfam
Location: 23254 - 23901 (-)
Gene ID: VDS02403.1
Type: pfam
Location: 23918 - 24532 (-)
Type: pfam
Location: 23918 - 24532 (-)
Gene ID: VDS02404.1
Type: TC
Location: 24519 - 25388 (-)
Type: TC
Location: 24519 - 25388 (-)
Gene ID: VDS02405.1
Type: pfam
Location: 25414 - 25734 (-)
Type: pfam
Location: 25414 - 25734 (-)
Gene ID: VDS02406.1
Type: CAZyme
Location: 26245 - 29685 (+)
Type: CAZyme
Location: 26245 - 29685 (+)
Gene ID: VDS02407.1
Type: TF
Location: 29766 - 30659 (-)
Type: TF
Location: 29766 - 30659 (-)
Gene ID: VDS02408.1
Type: null
Location: 30634 - 30795 (-)
Type: null
Location: 30634 - 30795 (-)
Gene ID: VDS02409.1
Type: pfam
Location: 30822 - 32300 (+)
Type: pfam
Location: 30822 - 32300 (+)
Taxonomic Lineage
Gene Composition
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