Cluster: PUL0101_Rep_532_C3
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: Rep_532
- CGC Family ID: CGCFAM_01071
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0101_Rep_532_C3 | Rep_532_c_21_6 | 9510 | 11885 | - | GH115 |
| CAZyme | PUL0101_Rep_532_C3 | Rep_532_c_21_9 | 17350 | 20193 | + | GH3 |
| pfam | PUL0101_Rep_532_C3 | Rep_532_c_21_10 | 20206 | 21255 | + | NAD_synthase | tRNA_Me_trans | QueC | tRNA_Me_trans_C | tRNA_Me_trans_M |
| peptidase | PUL0101_Rep_532_C3 | Rep_532_c_21_12 | 23028 | 24299 | - | U32.001 |
| pfam | PUL0101_Rep_532_C3 | Rep_532_c_21_13 | 24310 | 25377 | + | Dus |
| pfam | PUL0101_Rep_532_C3 | Rep_532_c_21_14 | 25396 | 26379 | - | PAP2 | PAP2_3 |
| pfam | PUL0101_Rep_532_C3 | Rep_532_c_21_15 | 26370 | 27380 | - | adh_short | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| TC | PUL0101_Rep_532_C3 | Rep_532_c_21_16 | 27386 | 28354 | - | 2.A.4.7.9 |
| pfam | PUL0101_Rep_532_C3 | Rep_532_c_21_17 | 28437 | 30587 | + | S1 | RNB | OB_RNB | OB_Dis3 | CSD2 |
| NULL(UNKNOWN) | PUL0101_Rep_532_C3 | Rep_532_c_21_19 | 30890 | 31804 | + | NULL(UNKNOWN) |
| pfam | PUL0101_Rep_532_C3 | Rep_532_c_21_20 | 31873 | 33027 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| pfam | PUL0101_Rep_532_C3 | Rep_532_c_21_21 | 33058 | 33867 | - | Aldolase_II |
| TC | PUL0101_Rep_532_C3 | Rep_532_c_21_22 | 33894 | 34904 | - | 2.A.7.6.1 |
| pfam | PUL0101_Rep_532_C3 | Rep_532_c_21_23 | 34967 | 36220 | - | RhaA |
| pfam | PUL0101_Rep_532_C3 | Rep_532_c_21_24 | 36226 | 37704 | - | FGGY_N | FGGY_C |
| TF | PUL0101_Rep_532_C3 | Rep_532_c_21_25 | 37867 | 38760 | + | HTH_AraC | HTH_AraC |
| CAZyme | PUL0101_Rep_532_C3 | Rep_532_c_21_26 | 38769 | 42260 | - | CBM67 | GH78 |
Gene ID: Rep_532_c_21_6
Type: CAZyme
Location: 9510 - 11885 (-)
Type: CAZyme
Location: 9510 - 11885 (-)
Gene ID: Rep_532_c_21_9
Type: CAZyme
Location: 17350 - 20193 (+)
Type: CAZyme
Location: 17350 - 20193 (+)
Gene ID: Rep_532_c_21_10
Type: pfam
Location: 20206 - 21255 (+)
Type: pfam
Location: 20206 - 21255 (+)
Gene ID: Rep_532_c_21_12
Type: peptidase
Location: 23028 - 24299 (-)
Type: peptidase
Location: 23028 - 24299 (-)
Gene ID: Rep_532_c_21_13
Type: pfam
Location: 24310 - 25377 (+)
Type: pfam
Location: 24310 - 25377 (+)
Gene ID: Rep_532_c_21_14
Type: pfam
Location: 25396 - 26379 (-)
Type: pfam
Location: 25396 - 26379 (-)
Gene ID: Rep_532_c_21_15
Type: pfam
Location: 26370 - 27380 (-)
Type: pfam
Location: 26370 - 27380 (-)
Gene ID: Rep_532_c_21_16
Type: TC
Location: 27386 - 28354 (-)
Type: TC
Location: 27386 - 28354 (-)
Gene ID: Rep_532_c_21_17
Type: pfam
Location: 28437 - 30587 (+)
Type: pfam
Location: 28437 - 30587 (+)
Gene ID: Rep_532_c_21_19
Type: null
Location: 30890 - 31804 (+)
Type: null
Location: 30890 - 31804 (+)
Gene ID: Rep_532_c_21_20
Type: pfam
Location: 31873 - 33027 (-)
Type: pfam
Location: 31873 - 33027 (-)
Gene ID: Rep_532_c_21_21
Type: pfam
Location: 33058 - 33867 (-)
Type: pfam
Location: 33058 - 33867 (-)
Gene ID: Rep_532_c_21_22
Type: TC
Location: 33894 - 34904 (-)
Type: TC
Location: 33894 - 34904 (-)
Gene ID: Rep_532_c_21_23
Type: pfam
Location: 34967 - 36220 (-)
Type: pfam
Location: 34967 - 36220 (-)
Gene ID: Rep_532_c_21_24
Type: pfam
Location: 36226 - 37704 (-)
Type: pfam
Location: 36226 - 37704 (-)
Gene ID: Rep_532_c_21_25
Type: TF
Location: 37867 - 38760 (+)
Type: TF
Location: 37867 - 38760 (+)
Gene ID: Rep_532_c_21_26
Type: CAZyme
Location: 38769 - 42260 (-)
Type: CAZyme
Location: 38769 - 42260 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551445
Gene Composition
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