Cluster: PUL0101
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: PUL0101
- CGC Family ID: CGCFAM_01071
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_DS990126 | BACPLE_RS06865 | 3 | 3485 | + | CBM67 | GH78 |
| TF | NZ_DS990126 | BACPLE_RS06870 | 3571 | 4464 | - | HTH_AraC | HTH_AraC |
| pfam | NZ_DS990126 | BACPLE_RS06875 | 4627 | 6105 | + | FGGY_N | FGGY_C |
| pfam | NZ_DS990126 | BACPLE_RS06880 | 6112 | 7365 | + | RhaA |
| TC | NZ_DS990126 | BACPLE_RS06885 | 7431 | 8441 | + | 2.A.7.6.1 |
| pfam | NZ_DS990126 | BACPLE_RS06890 | 8468 | 9277 | + | Aldolase_II |
| pfam | NZ_DS990126 | BACPLE_RS06895 | 9310 | 10464 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| NULL(UNKNOWN) | NZ_DS990126 | BACPLE_RS06900 | 10684 | 11589 | - | NULL(UNKNOWN) |
| pfam | NZ_DS990126 | BACPLE_RS06905 | 11879 | 14029 | - | S1 | RNB | OB_RNB | OB_Dis3 | CSD2 |
| TC | NZ_DS990126 | BACPLE_RS06910 | 14178 | 15080 | + | 2.A.4.7.2 |
| pfam | NZ_DS990126 | BACPLE_RS06915 | 15085 | 16095 | + | adh_short | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| pfam | NZ_DS990126 | BACPLE_RS06920 | 16092 | 17066 | + | PAP2 | PAP2_3 |
| pfam | NZ_DS990126 | BACPLE_RS06925 | 17082 | 18068 | - | Dus |
| peptidase | NZ_DS990126 | BACPLE_RS06930 | 18157 | 19428 | + | U32.001 |
| pfam | NZ_DS990126 | BACPLE_RS06935 | 19711 | 21207 | + | DUF3843 |
| pfam | NZ_DS990126 | BACPLE_RS06940 | 21208 | 22257 | - | NAD_synthase | tRNA_Me_trans | QueC | tRNA_Me_trans_C | tRNA_Me_trans_M |
| CAZyme | NZ_DS990126 | BACPLE_RS06945 | 22268 | 25111 | - | GH3 |
| CAZyme | NZ_DS990126 | BACPLE_RS06950 | 25468 | 27831 | + | GH115 |
| CAZyme | NZ_DS990126 | BACPLE_RS06955 | 28183 | 30288 | + | GH97 |
Gene ID: BACPLE_RS06865
Type: CAZyme
Location: 3 - 3485 (+)
Type: CAZyme
Location: 3 - 3485 (+)
Gene ID: BACPLE_RS06870
Type: TF
Location: 3571 - 4464 (-)
Type: TF
Location: 3571 - 4464 (-)
Gene ID: BACPLE_RS06875
Type: pfam
Location: 4627 - 6105 (+)
Type: pfam
Location: 4627 - 6105 (+)
Gene ID: BACPLE_RS06880
Type: pfam
Location: 6112 - 7365 (+)
Type: pfam
Location: 6112 - 7365 (+)
Gene ID: BACPLE_RS06885
Type: TC
Location: 7431 - 8441 (+)
Type: TC
Location: 7431 - 8441 (+)
Gene ID: BACPLE_RS06890
Type: pfam
Location: 8468 - 9277 (+)
Type: pfam
Location: 8468 - 9277 (+)
Gene ID: BACPLE_RS06895
Type: pfam
Location: 9310 - 10464 (+)
Type: pfam
Location: 9310 - 10464 (+)
Gene ID: BACPLE_RS06900
Type: null
Location: 10684 - 11589 (-)
Type: null
Location: 10684 - 11589 (-)
Gene ID: BACPLE_RS06905
Type: pfam
Location: 11879 - 14029 (-)
Type: pfam
Location: 11879 - 14029 (-)
Gene ID: BACPLE_RS06910
Type: TC
Location: 14178 - 15080 (+)
Type: TC
Location: 14178 - 15080 (+)
Gene ID: BACPLE_RS06915
Type: pfam
Location: 15085 - 16095 (+)
Type: pfam
Location: 15085 - 16095 (+)
Gene ID: BACPLE_RS06920
Type: pfam
Location: 16092 - 17066 (+)
Type: pfam
Location: 16092 - 17066 (+)
Gene ID: BACPLE_RS06925
Type: pfam
Location: 17082 - 18068 (-)
Type: pfam
Location: 17082 - 18068 (-)
Gene ID: BACPLE_RS06930
Type: peptidase
Location: 18157 - 19428 (+)
Type: peptidase
Location: 18157 - 19428 (+)
Gene ID: BACPLE_RS06935
Type: pfam
Location: 19711 - 21207 (+)
Type: pfam
Location: 19711 - 21207 (+)
Gene ID: BACPLE_RS06940
Type: pfam
Location: 21208 - 22257 (-)
Type: pfam
Location: 21208 - 22257 (-)
Gene ID: BACPLE_RS06945
Type: CAZyme
Location: 22268 - 25111 (-)
Type: CAZyme
Location: 22268 - 25111 (-)
Gene ID: BACPLE_RS06950
Type: CAZyme
Location: 25468 - 27831 (+)
Type: CAZyme
Location: 25468 - 27831 (+)
Gene ID: BACPLE_RS06955
Type: CAZyme
Location: 28183 - 30288 (+)
Type: CAZyme
Location: 28183 - 30288 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius
Gene Composition
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