Cluster: PUL0081
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: PUL0081
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | BA000032 | VPA0076 | 1 | 798 | - | MarR |
| STP | BA000032 | VPA0077 | 1039 | 1800 | + | PfkB |
| pfam | BA000032 | VPA0078 | 1819 | 2343 | + | Imp-YgjV |
| STP | BA000032 | VPA0079 | 2351 | 2671 | + | AraC_binding |
| pfam | BA000032 | VPA0080 | 2712 | 3347 | + | LacAB_rpiB | DUF3666 |
| peptidase | BA000032 | VPA0081 | 3424 | 4335 | + | S09.UPW |
| STP | BA000032 | VPA0082 | 4434 | 5363 | + | PfkB |
| pfam | BA000032 | VPA0083 | 5375 | 5998 | + | Aldolase |
| TC | BA000032 | VPA0084 | 6184 | 7923 | - | 2.A.21.3.12 |
| TC | BA000032 | VPA0085 | 8053 | 8730 | + | 1.B.35.1.7 |
| CAZyme | BA000032 | VPA0086 | 8746 | 10974 | + | PL9_1 |
| TC | BA000032 | VPA0087 | 11275 | 13047 | + | 2.A.21.3.12 |
| CAZyme | BA000032 | VPA0088 | 13104 | 14270 | + | PL22 | PL22 |
Gene ID: VPA0076
Type: TF
Location: 1 - 798 (-)
Type: TF
Location: 1 - 798 (-)
Gene ID: VPA0077
Type: STP
Location: 1039 - 1800 (+)
Type: STP
Location: 1039 - 1800 (+)
Gene ID: VPA0078
Type: pfam
Location: 1819 - 2343 (+)
Type: pfam
Location: 1819 - 2343 (+)
Gene ID: VPA0079
Type: STP
Location: 2351 - 2671 (+)
Type: STP
Location: 2351 - 2671 (+)
Gene ID: VPA0080
Type: pfam
Location: 2712 - 3347 (+)
Type: pfam
Location: 2712 - 3347 (+)
Gene ID: VPA0081
Type: peptidase
Location: 3424 - 4335 (+)
Type: peptidase
Location: 3424 - 4335 (+)
Gene ID: VPA0082
Type: STP
Location: 4434 - 5363 (+)
Type: STP
Location: 4434 - 5363 (+)
Gene ID: VPA0083
Type: pfam
Location: 5375 - 5998 (+)
Type: pfam
Location: 5375 - 5998 (+)
Gene ID: VPA0084
Type: TC
Location: 6184 - 7923 (-)
Type: TC
Location: 6184 - 7923 (-)
Gene ID: VPA0085
Type: TC
Location: 8053 - 8730 (+)
Type: TC
Location: 8053 - 8730 (+)
Gene ID: VPA0086
Type: CAZyme
Location: 8746 - 10974 (+)
Type: CAZyme
Location: 8746 - 10974 (+)
Gene ID: VPA0087
Type: TC
Location: 11275 - 13047 (+)
Type: TC
Location: 11275 - 13047 (+)
Gene ID: VPA0088
Type: CAZyme
Location: 13104 - 14270 (+)
Type: CAZyme
Location: 13104 - 14270 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Species
Vibrio parahaemolyticus
Gene Composition
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