Cluster: PUL0078
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: xylan
- Genome ID: PUL0078
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | YYYXYLRN | gnl|TC-DB|Q72H67|3.A.1.1.25 | 1 | 423 | + | 3.A.1.1.25 |
| TC | YYYXYLRN | gnl|TC-DB|G4FGN6|3.A.1.1.41 | 456 | 1283 | + | 3.A.1.1.41 |
| TF | YYYXYLRN | xylR | 1371 | 2570 | + | MarR |
| CAZyme | YYYXYLRN | xynA | 2599 | 4653 | + | CBM22 | CBM22 | GH10 |
| pfam | YYYXYLRN | AAB42045.1 | 4887 | 5498 | + | DUF6062 |
| pfam | YYYXYLRN | AAB42046.1 | 5554 | 6760 | + | GTP_EFTU | Dynamin_N | MMR_HSR1 |
Gene ID: gnl|TC-DB|Q72H67|3.A.1.1.25
Type: TC
Location: 1 - 423 (+)
Type: TC
Location: 1 - 423 (+)
Gene ID: gnl|TC-DB|G4FGN6|3.A.1.1.41
Type: TC
Location: 456 - 1283 (+)
Type: TC
Location: 456 - 1283 (+)
Gene ID: xylR
Type: TF
Location: 1371 - 2570 (+)
Type: TF
Location: 1371 - 2570 (+)
Gene ID: xynA
Type: CAZyme
Location: 2599 - 4653 (+)
Type: CAZyme
Location: 2599 - 4653 (+)
Gene ID: AAB42045.1
Type: pfam
Location: 4887 - 5498 (+)
Type: pfam
Location: 4887 - 5498 (+)
Gene ID: AAB42046.1
Type: pfam
Location: 5554 - 6760 (+)
Type: pfam
Location: 5554 - 6760 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Order
Caldicellulosiruptorales
Family
Caldicellulosiruptoraceae
Genus
Caldicellulosiruptor
Species
Caldicellulosiruptor sp. Rt8B.4
Gene Composition
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