Cluster: PUL0055_A43.bin_3_C0
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alginate
- Genome ID: A43.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0055_A43.bin_3_C0 | A43_contig_103_1706 | 2261644 | 2262363 | - | GntR |
| NULL(UNKNOWN) | PUL0055_A43.bin_3_C0 | A43_contig_103_1707 | 2262386 | 2262502 | + | NULL(UNKNOWN) |
| TC | PUL0055_A43.bin_3_C0 | A43_contig_103_1708 | 2262605 | 2265787 | + | 1.B.14.6.1 |
| TC | PUL0055_A43.bin_3_C0 | A43_contig_103_1709 | 2265800 | 2267320 | + | 8.A.46.1.5 |
| pfam | PUL0055_A43.bin_3_C0 | A43_contig_103_1710 | 2267341 | 2269023 | + | TIG |
| CAZyme | PUL0055_A43.bin_3_C0 | A43_contig_103_1711 | 2269027 | 2271291 | + | PL6 | PL6_1 |
| CAZyme | PUL0055_A43.bin_3_C0 | A43_contig_103_1712 | 2271338 | 2273545 | + | PL17 | PL17_2 |
Gene ID: A43_contig_103_1706
Type: TF
Location: 2261644 - 2262363 (-)
Type: TF
Location: 2261644 - 2262363 (-)
Gene ID: A43_contig_103_1707
Type: null
Location: 2262386 - 2262502 (+)
Type: null
Location: 2262386 - 2262502 (+)
Gene ID: A43_contig_103_1708
Type: TC
Location: 2262605 - 2265787 (+)
Type: TC
Location: 2262605 - 2265787 (+)
Gene ID: A43_contig_103_1709
Type: TC
Location: 2265800 - 2267320 (+)
Type: TC
Location: 2265800 - 2267320 (+)
Gene ID: A43_contig_103_1710
Type: pfam
Location: 2267341 - 2269023 (+)
Type: pfam
Location: 2267341 - 2269023 (+)
Gene ID: A43_contig_103_1711
Type: CAZyme
Location: 2269027 - 2271291 (+)
Type: CAZyme
Location: 2269027 - 2271291 (+)
Gene ID: A43_contig_103_1712
Type: CAZyme
Location: 2271338 - 2273545 (+)
Type: CAZyme
Location: 2271338 - 2273545 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Composition
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