Cluster: PUL0055
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alginate
- Genome ID: PUL0055
- CGC Family ID: CGCFAM_00716
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | GL945092 | HMPREF0127_01346 | 1 | 2208 | - | PL17 | PL17_2 |
| CAZyme | GL945092 | HMPREF0127_01347 | 2255 | 4519 | - | PL6 | PL6_1 |
| pfam | GL945092 | HMPREF0127_01348 | 4523 | 6205 | - | TIG |
| TC | GL945092 | HMPREF0127_01349 | 6226 | 7746 | - | 8.A.46.1.5 |
| TC | GL945092 | HMPREF0127_01350 | 7759 | 10941 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | GL945092 | HMPREF0127_01351 | 11044 | 11160 | - | NULL(UNKNOWN) |
| TF | GL945092 | HMPREF0127_01352 | 11183 | 11902 | + | GntR |
Gene ID: HMPREF0127_01346
Type: CAZyme
Location: 1 - 2208 (-)
Type: CAZyme
Location: 1 - 2208 (-)
Gene ID: HMPREF0127_01347
Type: CAZyme
Location: 2255 - 4519 (-)
Type: CAZyme
Location: 2255 - 4519 (-)
Gene ID: HMPREF0127_01348
Type: pfam
Location: 4523 - 6205 (-)
Type: pfam
Location: 4523 - 6205 (-)
Gene ID: HMPREF0127_01349
Type: TC
Location: 6226 - 7746 (-)
Type: TC
Location: 6226 - 7746 (-)
Gene ID: HMPREF0127_01350
Type: TC
Location: 7759 - 10941 (-)
Type: TC
Location: 7759 - 10941 (-)
Gene ID: HMPREF0127_01351
Type: null
Location: 11044 - 11160 (-)
Type: null
Location: 11044 - 11160 (-)
Gene ID: HMPREF0127_01352
Type: TF
Location: 11183 - 11902 (+)
Type: TF
Location: 11183 - 11902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp. 1_1_30
Gene Composition
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