Cluster: PUL0053_MGYG000003711_C2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alginate
- Genome ID: MGYG000003711
- CGC Family ID: CGCFAM_06417
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0053_MGYG000003711_C2 | MGYG000003711_3_32 | 43646 | 44389 | - | GntR |
| pfam | PUL0053_MGYG000003711_C2 | MGYG000003711_3_33 | 44492 | 47440 | - | TonB_dep_Rec_b-barrel | Plug |
| CAZyme | PUL0053_MGYG000003711_C2 | MGYG000003711_3_34 | 47697 | 49064 | + | PL6 |
| CAZyme | PUL0053_MGYG000003711_C2 | MGYG000003711_3_35 | 49061 | 51295 | + | PL17 | PL17_2 |
| TC | PUL0053_MGYG000003711_C2 | MGYG000003711_3_36 | 51292 | 52596 | + | 2.A.1.14.25 |
| pfam | PUL0053_MGYG000003711_C2 | MGYG000003711_3_37 | 52657 | 53409 | + | adh_short | KR | adh_short_C2 | SDR |
| pfam | PUL0053_MGYG000003711_C2 | MGYG000003711_3_38 | 53431 | 54618 | + | Lipase_GDSL | Lipase_GDSL_2 |
Gene ID: MGYG000003711_3_32
Type: TF
Location: 43646 - 44389 (-)
Type: TF
Location: 43646 - 44389 (-)
Gene ID: MGYG000003711_3_33
Type: pfam
Location: 44492 - 47440 (-)
Type: pfam
Location: 44492 - 47440 (-)
Gene ID: MGYG000003711_3_34
Type: CAZyme
Location: 47697 - 49064 (+)
Type: CAZyme
Location: 47697 - 49064 (+)
Gene ID: MGYG000003711_3_35
Type: CAZyme
Location: 49061 - 51295 (+)
Type: CAZyme
Location: 49061 - 51295 (+)
Gene ID: MGYG000003711_3_36
Type: TC
Location: 51292 - 52596 (+)
Type: TC
Location: 51292 - 52596 (+)
Gene ID: MGYG000003711_3_37
Type: pfam
Location: 52657 - 53409 (+)
Type: pfam
Location: 52657 - 53409 (+)
Gene ID: MGYG000003711_3_38
Type: pfam
Location: 53431 - 54618 (+)
Type: pfam
Location: 53431 - 54618 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Composition
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