Cluster: PUL0053_MGYG000003403_C1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alginate
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0053_MGYG000003403_C1 | MGYG000003403_1_92 | 95984 | 96727 | - | GntR |
| pfam | PUL0053_MGYG000003403_C1 | MGYG000003403_1_93 | 96830 | 99721 | - | TonB_dep_Rec_b-barrel | Plug |
| CAZyme | PUL0053_MGYG000003403_C1 | MGYG000003403_1_94 | 99963 | 101402 | + | PL6 |
| CAZyme | PUL0053_MGYG000003403_C1 | MGYG000003403_1_95 | 101399 | 103627 | + | PL17 | PL17_2 |
| TC | PUL0053_MGYG000003403_C1 | MGYG000003403_1_96 | 103624 | 104928 | + | 2.A.1.14.25 |
| pfam | PUL0053_MGYG000003403_C1 | MGYG000003403_1_97 | 104975 | 105727 | + | adh_short | KR | adh_short_C2 | SDR |
| pfam | PUL0053_MGYG000003403_C1 | MGYG000003403_1_98 | 105746 | 106933 | + | Lipase_GDSL | Lipase_GDSL_2 |
Gene ID: MGYG000003403_1_92
Type: TF
Location: 95984 - 96727 (-)
Type: TF
Location: 95984 - 96727 (-)
Gene ID: MGYG000003403_1_93
Type: pfam
Location: 96830 - 99721 (-)
Type: pfam
Location: 96830 - 99721 (-)
Gene ID: MGYG000003403_1_94
Type: CAZyme
Location: 99963 - 101402 (+)
Type: CAZyme
Location: 99963 - 101402 (+)
Gene ID: MGYG000003403_1_95
Type: CAZyme
Location: 101399 - 103627 (+)
Type: CAZyme
Location: 101399 - 103627 (+)
Gene ID: MGYG000003403_1_96
Type: TC
Location: 103624 - 104928 (+)
Type: TC
Location: 103624 - 104928 (+)
Gene ID: MGYG000003403_1_97
Type: pfam
Location: 104975 - 105727 (+)
Type: pfam
Location: 104975 - 105727 (+)
Gene ID: MGYG000003403_1_98
Type: pfam
Location: 105746 - 106933 (+)
Type: pfam
Location: 105746 - 106933 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Composition
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