Cluster: PUL0045_HRGMv2_0156_C0
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate: xylan
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_00044
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4721 | 6164031 | 6168164 | - | HTH_AraC | HTH_AraC |
| TC | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4722 | 6168560 | 6171733 | + | 1.B.14.6.1 |
| pfam | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4723 | 6171753 | 6173399 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4724 | 6173414 | 6174817 | + | SGBP_B_XBD |
| CAZyme | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4725 | 6174842 | 6177064 | + | CBM4 | GH10 |
| CAZyme | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4726 | 6177397 | 6179055 | + | CE20 | CE20 |
| TC | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4727 | 6179072 | 6180487 | + | 2.A.2.3.2 |
| CAZyme | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4728 | 6180527 | 6181657 | + | GH10 |
| CAZyme | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4729 | 6181684 | 6182661 | + | GH43_1 |
| CAZyme | PUL0045_HRGMv2_0156_C0 | HRGMv2_0156_1_4730 | 6182827 | 6184962 | + | GH67 |
Gene ID: HRGMv2_0156_1_4721
Type: TF
Location: 6164031 - 6168164 (-)
Type: TF
Location: 6164031 - 6168164 (-)
Gene ID: HRGMv2_0156_1_4722
Type: TC
Location: 6168560 - 6171733 (+)
Type: TC
Location: 6168560 - 6171733 (+)
Gene ID: HRGMv2_0156_1_4723
Type: pfam
Location: 6171753 - 6173399 (+)
Type: pfam
Location: 6171753 - 6173399 (+)
Gene ID: HRGMv2_0156_1_4724
Type: pfam
Location: 6173414 - 6174817 (+)
Type: pfam
Location: 6173414 - 6174817 (+)
Gene ID: HRGMv2_0156_1_4725
Type: CAZyme
Location: 6174842 - 6177064 (+)
Type: CAZyme
Location: 6174842 - 6177064 (+)
Gene ID: HRGMv2_0156_1_4726
Type: CAZyme
Location: 6177397 - 6179055 (+)
Type: CAZyme
Location: 6177397 - 6179055 (+)
Gene ID: HRGMv2_0156_1_4727
Type: TC
Location: 6179072 - 6180487 (+)
Type: TC
Location: 6179072 - 6180487 (+)
Gene ID: HRGMv2_0156_1_4728
Type: CAZyme
Location: 6180527 - 6181657 (+)
Type: CAZyme
Location: 6180527 - 6181657 (+)
Gene ID: HRGMv2_0156_1_4729
Type: CAZyme
Location: 6181684 - 6182661 (+)
Type: CAZyme
Location: 6181684 - 6182661 (+)
Gene ID: HRGMv2_0156_1_4730
Type: CAZyme
Location: 6182827 - 6184962 (+)
Type: CAZyme
Location: 6182827 - 6184962 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
Loading chart...
← Back to Cluster List