Cluster: PUL0044
🧬 Cluster Details
- Gene Count: 34
- CAZyme Count: 17
- Substrate: xylan
- Genome ID: PUL0044
- CGC Family ID: CGCFAM_00238
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | AAXF02000051 | BACOVA_03417 | 1 | 1605 | + | CBM91 | GH43_10 |
| NULL(UNKNOWN) | AAXF02000051 | BACOVA_03418 | 1 | 26 | - | NULL(UNKNOWN) |
| CAZyme | AAXF02000051 | BACOVA_03419 | 1702 | 4287 | + | GH3 |
| NULL(UNKNOWN) | AAXF02000051 | BACOVA_03420 | 4488 | 4649 | + | NULL(UNKNOWN) |
| CAZyme | AAXF02000051 | BACOVA_03421 | 4720 | 6447 | + | CBM91 | GH43_12 |
| CAZyme | AAXF02000051 | BACOVA_03422 | 6473 | 8917 | + | GH31_4 |
| CAZyme | AAXF02000051 | BACOVA_03423 | 8914 | 10914 | + | GH97 |
| CAZyme | AAXF02000051 | BACOVA_03424 | 10934 | 12265 | + | CBM6 | GH43_29 |
| CAZyme | AAXF02000051 | BACOVA_03425 | 12413 | 14215 | + | CBM91 | GH43_12 |
| TC | AAXF02000051 | BACOVA_03426 | 14336 | 17488 | + | 1.B.14.6.1 |
| pfam | AAXF02000051 | BACOVA_03427 | 17505 | 19376 | + | SusD_RagB | SusD-like_3 |
| TC | AAXF02000051 | BACOVA_03428 | 19409 | 22228 | + | 1.B.14.6.1 |
| pfam | AAXF02000051 | BACOVA_03429 | 22256 | 24031 | + | SusD_RagB | SusD-like_3 |
| pfam | AAXF02000051 | BACOVA_03430 | 24063 | 25097 | + | BT_3987-like_N | DUF5627 |
| CAZyme | AAXF02000051 | BACOVA_03431 | 25130 | 27382 | + | GH10 |
| CAZyme | AAXF02000051 | BACOVA_03432 | 27416 | 29059 | + | GH30_8 |
| CAZyme | AAXF02000051 | BACOVA_03433 | 29059 | 31902 | + | CBM35 | GH98 |
| CAZyme | AAXF02000051 | BACOVA_03434 | 31988 | 34531 | + | GH115 |
| CAZyme | AAXF02000051 | BACOVA_03435 | 34558 | 36474 | + | CE1 | CE6 |
| CAZyme | AAXF02000051 | BACOVA_03436 | 36482 | 37870 | + | CBM6 | GH43_29 |
| TF | AAXF02000051 | BACOVA_03437 | 37892 | 41911 | - | HTH_AraC | HTH_AraC |
| CAZyme | AAXF02000051 | BACOVA_03438 | 42070 | 44505 | - | GH95 |
| NULL(UNKNOWN) | AAXF02000051 | BACOVA_03439 | 44502 | 44672 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | AAXF02000051 | BACOVA_03440 | 44716 | 45183 | - | NULL(UNKNOWN) |
| TF | AAXF02000051 | BACOVA_03441 | 45402 | 49367 | + | HTH_8 | HTH_AraC |
| CAZyme | AAXF02000051 | BACOVA_03442 | 49547 | 51058 | + | GH30 |
| TC | AAXF02000051 | BACOVA_03443 | 51263 | 54484 | + | 1.B.14.6.1 |
| pfam | AAXF02000051 | BACOVA_03444 | 54498 | 56354 | + | SusD_RagB | SusD-like_3 |
| pfam | AAXF02000051 | BACOVA_03445 | 56338 | 57720 | + | SGBP_B_XBD |
| pfam | AAXF02000051 | BACOVA_03446 | 57746 | 59749 | + | SGBP_B_XBD |
| NULL(UNKNOWN) | AAXF02000051 | BACOVA_03447 | 59771 | 60190 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | AAXF02000051 | BACOVA_03448 | 60552 | 60677 | - | NULL(UNKNOWN) |
| CAZyme | AAXF02000051 | BACOVA_03449 | 60862 | 63432 | - | GH115 |
| CAZyme | AAXF02000051 | BACOVA_03450 | 63463 | 65394 | - | CE20 | CE20 |
Gene ID: BACOVA_03417
Type: CAZyme
Location: 1 - 1605 (+)
Type: CAZyme
Location: 1 - 1605 (+)
Gene ID: BACOVA_03418
Type: null
Location: 1 - 26 (-)
Type: null
Location: 1 - 26 (-)
Gene ID: BACOVA_03419
Type: CAZyme
Location: 1702 - 4287 (+)
Type: CAZyme
Location: 1702 - 4287 (+)
Gene ID: BACOVA_03420
Type: null
Location: 4488 - 4649 (+)
Type: null
Location: 4488 - 4649 (+)
Gene ID: BACOVA_03421
Type: CAZyme
Location: 4720 - 6447 (+)
Type: CAZyme
Location: 4720 - 6447 (+)
Gene ID: BACOVA_03422
Type: CAZyme
Location: 6473 - 8917 (+)
Type: CAZyme
Location: 6473 - 8917 (+)
Gene ID: BACOVA_03423
Type: CAZyme
Location: 8914 - 10914 (+)
Type: CAZyme
Location: 8914 - 10914 (+)
Gene ID: BACOVA_03424
Type: CAZyme
Location: 10934 - 12265 (+)
Type: CAZyme
Location: 10934 - 12265 (+)
Gene ID: BACOVA_03425
Type: CAZyme
Location: 12413 - 14215 (+)
Type: CAZyme
Location: 12413 - 14215 (+)
Gene ID: BACOVA_03426
Type: TC
Location: 14336 - 17488 (+)
Type: TC
Location: 14336 - 17488 (+)
Gene ID: BACOVA_03427
Type: pfam
Location: 17505 - 19376 (+)
Type: pfam
Location: 17505 - 19376 (+)
Gene ID: BACOVA_03428
Type: TC
Location: 19409 - 22228 (+)
Type: TC
Location: 19409 - 22228 (+)
Gene ID: BACOVA_03429
Type: pfam
Location: 22256 - 24031 (+)
Type: pfam
Location: 22256 - 24031 (+)
Gene ID: BACOVA_03430
Type: pfam
Location: 24063 - 25097 (+)
Type: pfam
Location: 24063 - 25097 (+)
Gene ID: BACOVA_03431
Type: CAZyme
Location: 25130 - 27382 (+)
Type: CAZyme
Location: 25130 - 27382 (+)
Gene ID: BACOVA_03432
Type: CAZyme
Location: 27416 - 29059 (+)
Type: CAZyme
Location: 27416 - 29059 (+)
Gene ID: BACOVA_03433
Type: CAZyme
Location: 29059 - 31902 (+)
Type: CAZyme
Location: 29059 - 31902 (+)
Gene ID: BACOVA_03434
Type: CAZyme
Location: 31988 - 34531 (+)
Type: CAZyme
Location: 31988 - 34531 (+)
Gene ID: BACOVA_03435
Type: CAZyme
Location: 34558 - 36474 (+)
Type: CAZyme
Location: 34558 - 36474 (+)
Gene ID: BACOVA_03436
Type: CAZyme
Location: 36482 - 37870 (+)
Type: CAZyme
Location: 36482 - 37870 (+)
Gene ID: BACOVA_03437
Type: TF
Location: 37892 - 41911 (-)
Type: TF
Location: 37892 - 41911 (-)
Gene ID: BACOVA_03438
Type: CAZyme
Location: 42070 - 44505 (-)
Type: CAZyme
Location: 42070 - 44505 (-)
Gene ID: BACOVA_03439
Type: null
Location: 44502 - 44672 (-)
Type: null
Location: 44502 - 44672 (-)
Gene ID: BACOVA_03440
Type: null
Location: 44716 - 45183 (-)
Type: null
Location: 44716 - 45183 (-)
Gene ID: BACOVA_03441
Type: TF
Location: 45402 - 49367 (+)
Type: TF
Location: 45402 - 49367 (+)
Gene ID: BACOVA_03442
Type: CAZyme
Location: 49547 - 51058 (+)
Type: CAZyme
Location: 49547 - 51058 (+)
Gene ID: BACOVA_03443
Type: TC
Location: 51263 - 54484 (+)
Type: TC
Location: 51263 - 54484 (+)
Gene ID: BACOVA_03444
Type: pfam
Location: 54498 - 56354 (+)
Type: pfam
Location: 54498 - 56354 (+)
Gene ID: BACOVA_03445
Type: pfam
Location: 56338 - 57720 (+)
Type: pfam
Location: 56338 - 57720 (+)
Gene ID: BACOVA_03446
Type: pfam
Location: 57746 - 59749 (+)
Type: pfam
Location: 57746 - 59749 (+)
Gene ID: BACOVA_03447
Type: null
Location: 59771 - 60190 (+)
Type: null
Location: 59771 - 60190 (+)
Gene ID: BACOVA_03448
Type: null
Location: 60552 - 60677 (-)
Type: null
Location: 60552 - 60677 (-)
Gene ID: BACOVA_03449
Type: CAZyme
Location: 60862 - 63432 (-)
Type: CAZyme
Location: 60862 - 63432 (-)
Gene ID: BACOVA_03450
Type: CAZyme
Location: 63463 - 65394 (-)
Type: CAZyme
Location: 63463 - 65394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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