Cluster: PUL0029
🧬 Cluster Details
- Gene Count: 24
- CAZyme Count: 8
- Substrate: arabinogalactan
- Genome ID: PUL0029
- CGC Family ID: CGCFAM_04190
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NC_015067 | BLLJ_RS09480 | 1 | 1830 | - | 3.A.1.135.6 |
| TC | NC_015067 | BLLJ_RS09485 | 2044 | 3915 | - | 3.A.1.135.6 |
| TF | NC_015067 | BLLJ_RS09490 | 4102 | 4623 | - | MarR |
| pfam | NC_015067 | BLLJ_RS09495 | 4985 | 5578 | + | Bro-N |
| CAZyme | NC_015067 | BLLJ_RS09500 | 6034 | 9870 | - | GH43_24 |
| CAZyme | NC_015067 | BLLJ_RS09505 | 10082 | 14623 | - | GH30_5 |
| TF | NC_015067 | BLLJ_RS09510 | 14927 | 16423 | - | 0045030 |
| TC | NC_015067 | BLLJ_RS09515 | 16763 | 18286 | - | 2.A.3.1.20 |
| pfam | NC_015067 | BLLJ_RS09520 | 18474 | 22157 | - | FtsX | FtsX |
| TC | NC_015067 | BLLJ_RS09525 | 22246 | 22947 | - | 3.A.1.122.8 |
| TF | NC_015067 | BLLJ_RS09530 | 23091 | 23660 | + | HTH_11 |
| TC | NC_015067 | BLLJ_RS09535 | 23883 | 25364 | + | 2.A.3.1.3 |
| CAZyme | NC_015067 | BLLJ_RS09540 | 25487 | 31441 | - | GH146 |
| pfam | NC_015067 | BLLJ_RS09545 | 32029 | 33132 | + | HATPase_c_4 |
| CAZyme | NC_015067 | BLLJ_RS09550 | 33237 | 38231 | - | GH43_22 | GH43_34 |
| CAZyme | NC_015067 | BLLJ_RS09555 | 38358 | 44360 | - | GH43_22 | GH43_26 |
| CAZyme | NC_015067 | BLLJ_RS09560 | 45249 | 48989 | - | GH43_27 |
| CAZyme | NC_015067 | BLLJ_RS09565 | 49233 | 52526 | - | GH43_22 |
| CAZyme | NC_015067 | BLLJ_RS09570 | 52873 | 56070 | - | GH43_22 |
| TC | NC_015067 | BLLJ_RS09575 | 56408 | 57013 | - | 9.B.28.1.3 |
| TC | NC_015067 | BLLJ_RS09580 | 57219 | 58061 | - | 3.A.1.1.45 |
| TC | NC_015067 | BLLJ_RS09585 | 58061 | 58915 | - | 3.A.1.1.45 |
| TF | NC_015067 | BLLJ_RS09590 | 59298 | 60314 | + | LacI |
| TC | NC_015067 | BLLJ_RS09595 | 60569 | 61897 | - | 3.A.1.1.45 |
Gene ID: BLLJ_RS09480
Type: TC
Location: 1 - 1830 (-)
Type: TC
Location: 1 - 1830 (-)
Gene ID: BLLJ_RS09485
Type: TC
Location: 2044 - 3915 (-)
Type: TC
Location: 2044 - 3915 (-)
Gene ID: BLLJ_RS09490
Type: TF
Location: 4102 - 4623 (-)
Type: TF
Location: 4102 - 4623 (-)
Gene ID: BLLJ_RS09495
Type: pfam
Location: 4985 - 5578 (+)
Type: pfam
Location: 4985 - 5578 (+)
Gene ID: BLLJ_RS09500
Type: CAZyme
Location: 6034 - 9870 (-)
Type: CAZyme
Location: 6034 - 9870 (-)
Gene ID: BLLJ_RS09505
Type: CAZyme
Location: 10082 - 14623 (-)
Type: CAZyme
Location: 10082 - 14623 (-)
Gene ID: BLLJ_RS09510
Type: TF
Location: 14927 - 16423 (-)
Type: TF
Location: 14927 - 16423 (-)
Gene ID: BLLJ_RS09515
Type: TC
Location: 16763 - 18286 (-)
Type: TC
Location: 16763 - 18286 (-)
Gene ID: BLLJ_RS09520
Type: pfam
Location: 18474 - 22157 (-)
Type: pfam
Location: 18474 - 22157 (-)
Gene ID: BLLJ_RS09525
Type: TC
Location: 22246 - 22947 (-)
Type: TC
Location: 22246 - 22947 (-)
Gene ID: BLLJ_RS09530
Type: TF
Location: 23091 - 23660 (+)
Type: TF
Location: 23091 - 23660 (+)
Gene ID: BLLJ_RS09535
Type: TC
Location: 23883 - 25364 (+)
Type: TC
Location: 23883 - 25364 (+)
Gene ID: BLLJ_RS09540
Type: CAZyme
Location: 25487 - 31441 (-)
Type: CAZyme
Location: 25487 - 31441 (-)
Gene ID: BLLJ_RS09545
Type: pfam
Location: 32029 - 33132 (+)
Type: pfam
Location: 32029 - 33132 (+)
Gene ID: BLLJ_RS09550
Type: CAZyme
Location: 33237 - 38231 (-)
Type: CAZyme
Location: 33237 - 38231 (-)
Gene ID: BLLJ_RS09555
Type: CAZyme
Location: 38358 - 44360 (-)
Type: CAZyme
Location: 38358 - 44360 (-)
Gene ID: BLLJ_RS09560
Type: CAZyme
Location: 45249 - 48989 (-)
Type: CAZyme
Location: 45249 - 48989 (-)
Gene ID: BLLJ_RS09565
Type: CAZyme
Location: 49233 - 52526 (-)
Type: CAZyme
Location: 49233 - 52526 (-)
Gene ID: BLLJ_RS09570
Type: CAZyme
Location: 52873 - 56070 (-)
Type: CAZyme
Location: 52873 - 56070 (-)
Gene ID: BLLJ_RS09575
Type: TC
Location: 56408 - 57013 (-)
Type: TC
Location: 56408 - 57013 (-)
Gene ID: BLLJ_RS09580
Type: TC
Location: 57219 - 58061 (-)
Type: TC
Location: 57219 - 58061 (-)
Gene ID: BLLJ_RS09585
Type: TC
Location: 58061 - 58915 (-)
Type: TC
Location: 58061 - 58915 (-)
Gene ID: BLLJ_RS09590
Type: TF
Location: 59298 - 60314 (+)
Type: TF
Location: 59298 - 60314 (+)
Gene ID: BLLJ_RS09595
Type: TC
Location: 60569 - 61897 (-)
Type: TC
Location: 60569 - 61897 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Composition
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