Cluster: PUL0021
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: PUL0021
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | NC_008526 | LSEI_RS12770 | 1 | 984 | - | NULL(UNKNOWN) |
| CAZyme | NC_008526 | LSEI_RS12775 | 1054 | 2979 | - | PL12_1 |
| pfam | NC_008526 | LSEI_RS12780 | 2918 | 3265 | - | YajC |
| pfam | NC_008526 | LSEI_RS12785 | 3265 | 3735 | - | EIIA-man |
| TC | NC_008526 | LSEI_RS12790 | 3855 | 4670 | - | 4.A.6.1.14 |
| TC | NC_008526 | LSEI_RS12795 | 4660 | 5472 | - | 4.A.6.1.14 |
| TC | NC_008526 | LSEI_RS12800 | 5625 | 6125 | - | 4.A.6.1.14 |
| CAZyme | NC_008526 | LSEI_RS12805 | 6225 | 7403 | - | GH88 |
| NULL(UNKNOWN) | NC_008526 | LSEI_RS12810 | 7400 | 8230 | - | NULL(UNKNOWN) |
| TF | NC_008526 | LSEI_RS12815 | 8445 | 9212 | + | MarR |
| pfam | NC_008526 | LSEI_RS12820 | 9486 | 10319 | + | KduI |
| STP | NC_008526 | LSEI_RS12825 | 10354 | 11178 | + | CHASE2 |
| STP | NC_008526 | LSEI_RS12835 | 11946 | 12965 | + | PfkB |
| pfam | NC_008526 | LSEI_RS12840 | 13068 | 13712 | - | DNA_alkylation |
| STP | NC_008526 | LSEI_RS12845 | 13781 | 14470 | - | DeoRC |
| NULL(UNKNOWN) | NC_008526 | LSEI_RS12850 | 14628 | 16592 | - | NULL(UNKNOWN) |
Gene ID: LSEI_RS12770
Type: null
Location: 1 - 984 (-)
Type: null
Location: 1 - 984 (-)
Gene ID: LSEI_RS12775
Type: CAZyme
Location: 1054 - 2979 (-)
Type: CAZyme
Location: 1054 - 2979 (-)
Gene ID: LSEI_RS12780
Type: pfam
Location: 2918 - 3265 (-)
Type: pfam
Location: 2918 - 3265 (-)
Gene ID: LSEI_RS12785
Type: pfam
Location: 3265 - 3735 (-)
Type: pfam
Location: 3265 - 3735 (-)
Gene ID: LSEI_RS12790
Type: TC
Location: 3855 - 4670 (-)
Type: TC
Location: 3855 - 4670 (-)
Gene ID: LSEI_RS12795
Type: TC
Location: 4660 - 5472 (-)
Type: TC
Location: 4660 - 5472 (-)
Gene ID: LSEI_RS12800
Type: TC
Location: 5625 - 6125 (-)
Type: TC
Location: 5625 - 6125 (-)
Gene ID: LSEI_RS12805
Type: CAZyme
Location: 6225 - 7403 (-)
Type: CAZyme
Location: 6225 - 7403 (-)
Gene ID: LSEI_RS12810
Type: null
Location: 7400 - 8230 (-)
Type: null
Location: 7400 - 8230 (-)
Gene ID: LSEI_RS12815
Type: TF
Location: 8445 - 9212 (+)
Type: TF
Location: 8445 - 9212 (+)
Gene ID: LSEI_RS12820
Type: pfam
Location: 9486 - 10319 (+)
Type: pfam
Location: 9486 - 10319 (+)
Gene ID: LSEI_RS12825
Type: STP
Location: 10354 - 11178 (+)
Type: STP
Location: 10354 - 11178 (+)
Gene ID: LSEI_RS12835
Type: STP
Location: 11946 - 12965 (+)
Type: STP
Location: 11946 - 12965 (+)
Gene ID: LSEI_RS12840
Type: pfam
Location: 13068 - 13712 (-)
Type: pfam
Location: 13068 - 13712 (-)
Gene ID: LSEI_RS12845
Type: STP
Location: 13781 - 14470 (-)
Type: STP
Location: 13781 - 14470 (-)
Gene ID: LSEI_RS12850
Type: null
Location: 14628 - 16592 (-)
Type: null
Location: 14628 - 16592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus casei
Gene Composition
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