Cluster: PUL0020
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: PUL0020
- CGC Family ID: CGCFAM_06434
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | NC_013199 | LC705_RS12690 | 1 | 939 | - | NULL(UNKNOWN) |
| CAZyme | NC_013199 | LC705_RS12695 | 1059 | 2984 | - | PL12_1 |
| pfam | NC_013199 | LC705_RS12700 | 2923 | 3270 | - | YajC |
| pfam | NC_013199 | LC705_RS12705 | 3270 | 3737 | - | EIIA-man |
| TC | NC_013199 | LC705_RS12710 | 3823 | 4638 | - | 4.A.6.1.14 |
| TC | NC_013199 | LC705_RS12715 | 4628 | 5440 | - | 4.A.6.1.14 |
| TC | NC_013199 | LC705_RS12720 | 5469 | 5969 | - | 4.A.6.1.14 |
| CAZyme | NC_013199 | LC705_RS12725 | 5982 | 7160 | - | GH88 |
| NULL(UNKNOWN) | NC_013199 | LC705_RS12730 | 7157 | 7987 | - | NULL(UNKNOWN) |
| TF | NC_013199 | LC705_RS12735 | 8211 | 8978 | + | TrmB |
| pfam | NC_013199 | LC705_RS12740 | 9210 | 10055 | + | KduI |
| sulfatase | NC_013199 | LC705_RS12745 | 10089 | 10913 | + | S1_2 |
| pfam | NC_013199 | LC705_RS12750 | 11033 | 11686 | + | Aldolase |
| STP | NC_013199 | LC705_RS12755 | 11691 | 12710 | + | PfkB |
| pfam | NC_013199 | LC705_RS12760 | 12827 | 13516 | - | Rib_5-P_isom_A |
| CAZyme | NC_013199 | LC705_RS12765 | 13722 | 16781 | - | PL8 |
Gene ID: LC705_RS12690
Type: null
Location: 1 - 939 (-)
Type: null
Location: 1 - 939 (-)
Gene ID: LC705_RS12695
Type: CAZyme
Location: 1059 - 2984 (-)
Type: CAZyme
Location: 1059 - 2984 (-)
Gene ID: LC705_RS12700
Type: pfam
Location: 2923 - 3270 (-)
Type: pfam
Location: 2923 - 3270 (-)
Gene ID: LC705_RS12705
Type: pfam
Location: 3270 - 3737 (-)
Type: pfam
Location: 3270 - 3737 (-)
Gene ID: LC705_RS12710
Type: TC
Location: 3823 - 4638 (-)
Type: TC
Location: 3823 - 4638 (-)
Gene ID: LC705_RS12715
Type: TC
Location: 4628 - 5440 (-)
Type: TC
Location: 4628 - 5440 (-)
Gene ID: LC705_RS12720
Type: TC
Location: 5469 - 5969 (-)
Type: TC
Location: 5469 - 5969 (-)
Gene ID: LC705_RS12725
Type: CAZyme
Location: 5982 - 7160 (-)
Type: CAZyme
Location: 5982 - 7160 (-)
Gene ID: LC705_RS12730
Type: null
Location: 7157 - 7987 (-)
Type: null
Location: 7157 - 7987 (-)
Gene ID: LC705_RS12735
Type: TF
Location: 8211 - 8978 (+)
Type: TF
Location: 8211 - 8978 (+)
Gene ID: LC705_RS12740
Type: pfam
Location: 9210 - 10055 (+)
Type: pfam
Location: 9210 - 10055 (+)
Gene ID: LC705_RS12745
Type: sulfatase
Location: 10089 - 10913 (+)
Type: sulfatase
Location: 10089 - 10913 (+)
Gene ID: LC705_RS12750
Type: pfam
Location: 11033 - 11686 (+)
Type: pfam
Location: 11033 - 11686 (+)
Gene ID: LC705_RS12755
Type: STP
Location: 11691 - 12710 (+)
Type: STP
Location: 11691 - 12710 (+)
Gene ID: LC705_RS12760
Type: pfam
Location: 12827 - 13516 (-)
Type: pfam
Location: 12827 - 13516 (-)
Gene ID: LC705_RS12765
Type: CAZyme
Location: 13722 - 16781 (-)
Type: CAZyme
Location: 13722 - 16781 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus rhamnosus
Gene Composition
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