dbCAN HGM

Cluster: PUL0010

Cluster Details
Gene Composition
Taxonomic Lineage
Gene Composition

🧬 Cluster Details

Gene Count: 42
CAZyme Count: 8
Substrate: xylan
Genome ID: PUL0010
CGC Family ID: CGCFAM_04134
Continent: NA
Source Study: dbCAN-PUL Database →

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
pfam	NC_009328	GTNG_RS09195	1	1500	-	FGGY_N \| FGGY_C
NULL(UNKNOWN)	NC_009328	GTNG_RS09200	1515	2852	-	NULL(UNKNOWN)
CAZyme	NC_009328	GTNG_RS09205	2951	4558	-	CBM91 \| GH43_11
pfam	NC_009328	GTNG_RS09210	5004	5666	-	Lipase_GDSL \| Lipase_GDSL_2
pfam	NC_009328	GTNG_RS09215	5689	6483	-	DUF34_NIF3
CAZyme	NC_009328	GTNG_RS09220	7000	8223	+	GH10
TC	NC_009328	GTNG_RS09225	8427	9068	-	9.B.28.1.5
pfam	NC_009328	GTNG_RS09230	9148	9993	-	adh_short \| KR \| adh_short_C2
pfam	NC_009328	GTNG_RS09235	9969	11084	-	UxuA
pfam	NC_009328	GTNG_RS09240	11105	12508	-	UxaC
TF	NC_009328	GTNG_RS09245	12550	13248	-	GntR
sulfatase	NC_009328	GTNG_RS09250	13366	14016	-	S1_27
STP	NC_009328	GTNG_RS09255	14034	14987	-	PfkB
CAZyme	NC_009328	GTNG_RS09260	15020	16540	-	GH39
CAZyme	NC_009328	GTNG_RS09265	16557	18611	-	GH67
TC	NC_009328	GTNG_RS09270	18627	19517	-	3.A.1.1.9
TC	NC_009328	GTNG_RS09275	19532	20482	-	3.A.1.1.9
TC	NC_009328	GTNG_RS09280	20613	22256	-	3.A.1.1.9
CAZyme	NC_009328	GTNG_RS09285	22805	23800	-	GH10
CAZyme	NC_009328	GTNG_RS09290	23803	25920	-	GH52
CAZyme	NC_009328	GTNG_RS09295	26031	26657	-	CE4
sulfatase	NC_009328	GTNG_RS09300	26671	27720	-	S1_4
TC	NC_009328	GTNG_RS09305	27936	28802	-	3.A.1.1.41
TC	NC_009328	GTNG_RS09310	28817	29686	-	3.A.1.1.18
STP	NC_009328	GTNG_RS09315	29762	31084	-	SBP_bac_1
TF	NC_009328	GTNG_RS09320	31199	31990	-	HTH_AraC \| HTH_AraC
TC	NC_009328	GTNG_RS09325	31990	33720	-	8.A.59.2.1
NULL(UNKNOWN)	NC_009328	GTNG_RS09330	34226	34417	-	NULL(UNKNOWN)
pfam	NC_009328	GTNG_RS09340	36252	37466	-	Fe-ADH_2
pfam	NC_009328	GTNG_RS09345	37463	38272	-	Hydrolase \| Hydrolase_like \| Hydrolase_6 \| HAD_2
pfam	NC_009328	GTNG_RS09350	38330	39325	-	GFO_IDH_MocA \| GFO_IDH_MocA_C \| GFO_IDH_MocA_C3
CAZyme	NC_009328	GTNG_RS09355	39388	40896	-	GH51_1
TC	NC_009328	GTNG_RS09360	40936	41781	-	3.A.1.1.34
TC	NC_009328	GTNG_RS09365	41785	42717	-	3.A.1.1.34
TC	NC_009328	GTNG_RS09370	42845	44152	-	3.A.1.1.34
pfam	NC_009328	GTNG_RS09375	44653	46143	-	AraA_N \| Arabinose_Iso_C \| AraA_central
pfam	NC_009328	GTNG_RS09380	46160	47854	-	FGGY_N \| FGGY_C
pfam	NC_009328	GTNG_RS09385	47870	48556	-	Aldolase_II
TF	NC_009328	GTNG_RS09390	48648	49742	-	GntR
TC	NC_009328	GTNG_RS09395	49862	51085	-	3.A.1.2.5
TC	NC_009328	GTNG_RS09400	51087	52628	-	3.A.1.2.5
TC	NC_009328	GTNG_RS09405	52702	53778	-	3.A.1.2.5

Gene ID: GTNG_RS09195
Type: pfam
Location: 1 - 1500 (-)

Gene ID: GTNG_RS09200
Type: null
Location: 1515 - 2852 (-)

Gene ID: GTNG_RS09205
Type: CAZyme
Location: 2951 - 4558 (-)

Gene ID: GTNG_RS09210
Type: pfam
Location: 5004 - 5666 (-)

Gene ID: GTNG_RS09215
Type: pfam
Location: 5689 - 6483 (-)

Gene ID: GTNG_RS09220
Type: CAZyme
Location: 7000 - 8223 (+)

Gene ID: GTNG_RS09225
Type: TC
Location: 8427 - 9068 (-)

Gene ID: GTNG_RS09230
Type: pfam
Location: 9148 - 9993 (-)

Gene ID: GTNG_RS09235
Type: pfam
Location: 9969 - 11084 (-)

Gene ID: GTNG_RS09240
Type: pfam
Location: 11105 - 12508 (-)

Gene ID: GTNG_RS09245
Type: TF
Location: 12550 - 13248 (-)

Gene ID: GTNG_RS09250
Type: sulfatase
Location: 13366 - 14016 (-)

Gene ID: GTNG_RS09255
Type: STP
Location: 14034 - 14987 (-)

Gene ID: GTNG_RS09260
Type: CAZyme
Location: 15020 - 16540 (-)

Gene ID: GTNG_RS09265
Type: CAZyme
Location: 16557 - 18611 (-)

Gene ID: GTNG_RS09270
Type: TC
Location: 18627 - 19517 (-)

Gene ID: GTNG_RS09275
Type: TC
Location: 19532 - 20482 (-)

Gene ID: GTNG_RS09280
Type: TC
Location: 20613 - 22256 (-)

Gene ID: GTNG_RS09285
Type: CAZyme
Location: 22805 - 23800 (-)

Gene ID: GTNG_RS09290
Type: CAZyme
Location: 23803 - 25920 (-)

Gene ID: GTNG_RS09295
Type: CAZyme
Location: 26031 - 26657 (-)

Gene ID: GTNG_RS09300
Type: sulfatase
Location: 26671 - 27720 (-)

Gene ID: GTNG_RS09305
Type: TC
Location: 27936 - 28802 (-)

Gene ID: GTNG_RS09310
Type: TC
Location: 28817 - 29686 (-)

Gene ID: GTNG_RS09315
Type: STP
Location: 29762 - 31084 (-)

Gene ID: GTNG_RS09320
Type: TF
Location: 31199 - 31990 (-)

Gene ID: GTNG_RS09325
Type: TC
Location: 31990 - 33720 (-)

Gene ID: GTNG_RS09330
Type: null
Location: 34226 - 34417 (-)

Gene ID: GTNG_RS09340
Type: pfam
Location: 36252 - 37466 (-)

Gene ID: GTNG_RS09345
Type: pfam
Location: 37463 - 38272 (-)

Gene ID: GTNG_RS09350
Type: pfam
Location: 38330 - 39325 (-)

Gene ID: GTNG_RS09355
Type: CAZyme
Location: 39388 - 40896 (-)

Gene ID: GTNG_RS09360
Type: TC
Location: 40936 - 41781 (-)

Gene ID: GTNG_RS09365
Type: TC
Location: 41785 - 42717 (-)

Gene ID: GTNG_RS09370
Type: TC
Location: 42845 - 44152 (-)

Gene ID: GTNG_RS09375
Type: pfam
Location: 44653 - 46143 (-)

Gene ID: GTNG_RS09380
Type: pfam
Location: 46160 - 47854 (-)

Gene ID: GTNG_RS09385
Type: pfam
Location: 47870 - 48556 (-)

Gene ID: GTNG_RS09390
Type: TF
Location: 48648 - 49742 (-)

Gene ID: GTNG_RS09395
Type: TC
Location: 49862 - 51085 (-)

Gene ID: GTNG_RS09400
Type: TC
Location: 51087 - 52628 (-)

Gene ID: GTNG_RS09405
Type: TC
Location: 52702 - 53778 (-)

Taxonomic Lineage

Domain

Bacteria

→

Phylum

Bacillota

→

Class

Bacilli

→

Order

Bacillales

→

Family

Bacillaceae

→

Genus

Geobacillus

→

Species

Geobacillus thermodenitrificans

Gene Composition

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