Cluster: PUL0007
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: PUL0007
- CGC Family ID: CGCFAM_06410
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| STP | LN890332 | LEKG_1953 | 1 | 129 | - | HTH_7 |
| pfam | LN890332 | LEKG_1954 | 229 | 1419 | - | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| pfam | LN890332 | LEKG_1955 | 1442 | 2446 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| pfam | LN890332 | LEKG_1956 | 2453 | 3961 | - | GalP_UDP_transf | GalP_UDP_tr_C |
| CAZyme | LN890332 | LEKG_1957 | 4087 | 5325 | - | GH53 |
| TC | LN890332 | LEKG_1958 | 5347 | 7266 | - | 2.A.2.2.2 |
| CAZyme | LN890332 | LEKG_1959 | 7282 | 9333 | - | GH42 |
| TF | LN890332 | LEKG_1960 | 9546 | 10559 | + | LacI |
Gene ID: LEKG_1953
Type: STP
Location: 1 - 129 (-)
Type: STP
Location: 1 - 129 (-)
Gene ID: LEKG_1954
Type: pfam
Location: 229 - 1419 (-)
Type: pfam
Location: 229 - 1419 (-)
Gene ID: LEKG_1955
Type: pfam
Location: 1442 - 2446 (-)
Type: pfam
Location: 1442 - 2446 (-)
Gene ID: LEKG_1956
Type: pfam
Location: 2453 - 3961 (-)
Type: pfam
Location: 2453 - 3961 (-)
Gene ID: LEKG_1957
Type: CAZyme
Location: 4087 - 5325 (-)
Type: CAZyme
Location: 4087 - 5325 (-)
Gene ID: LEKG_1958
Type: TC
Location: 5347 - 7266 (-)
Type: TC
Location: 5347 - 7266 (-)
Gene ID: LEKG_1959
Type: CAZyme
Location: 7282 - 9333 (-)
Type: CAZyme
Location: 7282 - 9333 (-)
Gene ID: LEKG_1960
Type: TF
Location: 9546 - 10559 (+)
Type: TF
Location: 9546 - 10559 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Leuconostoc
Species
Leuconostoc gelidum
Gene Composition
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