Cluster: PUL0001
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 9
- Substrate: beta-mannan
- Genome ID: PUL0001
- CGC Family ID: CGCFAM_00226
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | GG692714 | ROSINTL182_05469 | 1 | 1569 | - | GH1 |
| CAZyme | GG692714 | ROSINTL182_05470 | 1607 | 2305 | - | GH1 |
| CAZyme | GG692714 | ROSINTL182_05471 | 2329 | 3447 | - | CBM35inCE17 | CE17 |
| CAZyme | GG692714 | ROSINTL182_05472 | 3486 | 3758 | - | CE2 |
| CAZyme | GG692714 | ROSINTL182_05473 | 3859 | 4637 | - | CE2 |
| CAZyme | GG692714 | ROSINTL182_05474 | 4731 | 5753 | - | GH130_2 |
| CAZyme | GG692714 | ROSINTL182_05475 | 5836 | 7029 | - | GH130_1 |
| pfam | GG692714 | ROSINTL182_05476 | 7058 | 8287 | - | GlcNAc_2-epim |
| TC | GG692714 | ROSINTL182_05477 | 8309 | 9184 | - | 3.A.1.1.27 |
| TC | GG692714 | ROSINTL182_05478 | 9189 | 10214 | - | 3.A.1.1.23 |
| STP | GG692714 | ROSINTL182_05479 | 10265 | 11734 | - | SBP_bac_1 |
| TF | GG692714 | ROSINTL182_05480 | 13099 | 14124 | - | LacI |
| CAZyme | GG692714 | ROSINTL182_05481 | 14167 | 16356 | - | GH36 |
| pfam | GG692714 | ROSINTL182_05482 | 16373 | 18091 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | GG692714 | ROSINTL182_05483 | 18223 | 19158 | - | GH113 |
Gene ID: ROSINTL182_05469
Type: CAZyme
Location: 1 - 1569 (-)
Type: CAZyme
Location: 1 - 1569 (-)
Gene ID: ROSINTL182_05470
Type: CAZyme
Location: 1607 - 2305 (-)
Type: CAZyme
Location: 1607 - 2305 (-)
Gene ID: ROSINTL182_05471
Type: CAZyme
Location: 2329 - 3447 (-)
Type: CAZyme
Location: 2329 - 3447 (-)
Gene ID: ROSINTL182_05472
Type: CAZyme
Location: 3486 - 3758 (-)
Type: CAZyme
Location: 3486 - 3758 (-)
Gene ID: ROSINTL182_05473
Type: CAZyme
Location: 3859 - 4637 (-)
Type: CAZyme
Location: 3859 - 4637 (-)
Gene ID: ROSINTL182_05474
Type: CAZyme
Location: 4731 - 5753 (-)
Type: CAZyme
Location: 4731 - 5753 (-)
Gene ID: ROSINTL182_05475
Type: CAZyme
Location: 5836 - 7029 (-)
Type: CAZyme
Location: 5836 - 7029 (-)
Gene ID: ROSINTL182_05476
Type: pfam
Location: 7058 - 8287 (-)
Type: pfam
Location: 7058 - 8287 (-)
Gene ID: ROSINTL182_05477
Type: TC
Location: 8309 - 9184 (-)
Type: TC
Location: 8309 - 9184 (-)
Gene ID: ROSINTL182_05478
Type: TC
Location: 9189 - 10214 (-)
Type: TC
Location: 9189 - 10214 (-)
Gene ID: ROSINTL182_05479
Type: STP
Location: 10265 - 11734 (-)
Type: STP
Location: 10265 - 11734 (-)
Gene ID: ROSINTL182_05480
Type: TF
Location: 13099 - 14124 (-)
Type: TF
Location: 13099 - 14124 (-)
Gene ID: ROSINTL182_05481
Type: CAZyme
Location: 14167 - 16356 (-)
Type: CAZyme
Location: 14167 - 16356 (-)
Gene ID: ROSINTL182_05482
Type: pfam
Location: 16373 - 18091 (-)
Type: pfam
Location: 16373 - 18091 (-)
Gene ID: ROSINTL182_05483
Type: CAZyme
Location: 18223 - 19158 (-)
Type: CAZyme
Location: 18223 - 19158 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Composition
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