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Cluster: MurphyR_2019_SRR7411406_bin.9_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_6 6862 7692 - 3.A.1.132.3
pfam MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_7 7951 10830 + UvrA_DNA-bind | UvrA_inter
pfam MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_8 10965 11465 + tRNA_edit
TC MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_9 11469 13769 + 2.A.66.4.4
pfam MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_10 13776 15716 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_11 16082 17695 + 3.A.1.5.27
TC MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_12 17853 18809 + 3.A.1.5.38
TC MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_13 18813 20828 + 3.A.1.5.25
TC MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_14 20829 21656 + 3.A.1.5.27
CAZyme MurphyR_2019_SRR7411406_bin.9_k141_22809 MurphyR_2019_SRR7411406_bin.9_k141_22809_15 21788 22714 + CE7
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_6
Type: TC
Location: 6862 - 7692 (-)
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_7
Type: pfam
Location: 7951 - 10830 (+)
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_8
Type: pfam
Location: 10965 - 11465 (+)
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_9
Type: TC
Location: 11469 - 13769 (+)
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_10
Type: pfam
Location: 13776 - 15716 (+)
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_11
Type: TC
Location: 16082 - 17695 (+)
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_12
Type: TC
Location: 17853 - 18809 (+)
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_13
Type: TC
Location: 18813 - 20828 (+)
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_14
Type: TC
Location: 20829 - 21656 (+)
Gene ID: MurphyR_2019_SRR7411406_bin.9_k141_22809_15
Type: CAZyme
Location: 21788 - 22714 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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