dbCAN Logo

Cluster: MurphyR_2019_SRR7411400_bin.18_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7411400_bin.18_k141_45546 MurphyR_2019_SRR7411400_bin.18_k141_45546_3 3105 5357 + 1.I.1.1.3
STP MurphyR_2019_SRR7411400_bin.18_k141_45546 MurphyR_2019_SRR7411400_bin.18_k141_45546_4 5979 6740 + Fer4
TC MurphyR_2019_SRR7411400_bin.18_k141_45546 MurphyR_2019_SRR7411400_bin.18_k141_45546_5 7164 7676 + 4.A.1.2.5
pfam MurphyR_2019_SRR7411400_bin.18_k141_45546 MurphyR_2019_SRR7411400_bin.18_k141_45546_6 7695 8549 + PRD | PRD | CAT_RBD
TC MurphyR_2019_SRR7411400_bin.18_k141_45546 MurphyR_2019_SRR7411400_bin.18_k141_45546_7 8649 10265 + 4.A.1.1.3
CAZyme MurphyR_2019_SRR7411400_bin.18_k141_45546 MurphyR_2019_SRR7411400_bin.18_k141_45546_8 10269 11651 + GH4
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_45546_3
Type: TC
Location: 3105 - 5357 (+)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_45546_4
Type: STP
Location: 5979 - 6740 (+)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_45546_5
Type: TC
Location: 7164 - 7676 (+)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_45546_6
Type: pfam
Location: 7695 - 8549 (+)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_45546_7
Type: TC
Location: 8649 - 10265 (+)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_45546_8
Type: CAZyme
Location: 10269 - 11651 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List