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Cluster: MurphyR_2019_SRR7411400_bin.18_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7411400_bin.18_k141_42112 MurphyR_2019_SRR7411400_bin.18_k141_42112_1 3 401 - 4.A.3.1.1
CAZyme MurphyR_2019_SRR7411400_bin.18_k141_42112 MurphyR_2019_SRR7411400_bin.18_k141_42112_2 578 2020 - GH1
TF MurphyR_2019_SRR7411400_bin.18_k141_42112 MurphyR_2019_SRR7411400_bin.18_k141_42112_3 2362 3399 + LacI
CAZyme MurphyR_2019_SRR7411400_bin.18_k141_42112 MurphyR_2019_SRR7411400_bin.18_k141_42112_4 3670 5109 - GH1
TC MurphyR_2019_SRR7411400_bin.18_k141_42112 MurphyR_2019_SRR7411400_bin.18_k141_42112_5 5176 6951 - 4.A.3.1.1
TF MurphyR_2019_SRR7411400_bin.18_k141_42112 MurphyR_2019_SRR7411400_bin.18_k141_42112_6 7308 8312 + LacI
TC MurphyR_2019_SRR7411400_bin.18_k141_42112 MurphyR_2019_SRR7411400_bin.18_k141_42112_7 8527 8865 + 4.A.3.1.2
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_42112_1
Type: TC
Location: 3 - 401 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_42112_2
Type: CAZyme
Location: 578 - 2020 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_42112_3
Type: TF
Location: 2362 - 3399 (+)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_42112_4
Type: CAZyme
Location: 3670 - 5109 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_42112_5
Type: TC
Location: 5176 - 6951 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_42112_6
Type: TF
Location: 7308 - 8312 (+)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_42112_7
Type: TC
Location: 8527 - 8865 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7411400_bin.18_k141_42112_3 vegetarian > omnivore 1.05260 0.02242

🧭 Explore Read Mapping of CGC

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