Cluster: MurphyR_2019_SRR7411400_bin.18_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411400_bin.18
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7411400_bin.18_k141_27784 | MurphyR_2019_SRR7411400_bin.18_k141_27784_18 | 17762 | 18688 | - | CE7 |
| TC | MurphyR_2019_SRR7411400_bin.18_k141_27784 | MurphyR_2019_SRR7411400_bin.18_k141_27784_19 | 18820 | 19647 | - | 3.A.1.5.27 |
| TC | MurphyR_2019_SRR7411400_bin.18_k141_27784 | MurphyR_2019_SRR7411400_bin.18_k141_27784_20 | 19648 | 21663 | - | 3.A.1.5.25 |
| TC | MurphyR_2019_SRR7411400_bin.18_k141_27784 | MurphyR_2019_SRR7411400_bin.18_k141_27784_21 | 21667 | 22623 | - | 3.A.1.5.38 |
| TC | MurphyR_2019_SRR7411400_bin.18_k141_27784 | MurphyR_2019_SRR7411400_bin.18_k141_27784_22 | 22781 | 24394 | - | 3.A.1.5.27 |
| pfam | MurphyR_2019_SRR7411400_bin.18_k141_27784 | MurphyR_2019_SRR7411400_bin.18_k141_27784_23 | 24759 | 26699 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | MurphyR_2019_SRR7411400_bin.18_k141_27784 | MurphyR_2019_SRR7411400_bin.18_k141_27784_24 | 26706 | 28388 | - | 2.A.66.4.4 |
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_27784_18
Type: CAZyme
Location: 17762 - 18688 (-)
Type: CAZyme
Location: 17762 - 18688 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_27784_19
Type: TC
Location: 18820 - 19647 (-)
Type: TC
Location: 18820 - 19647 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_27784_20
Type: TC
Location: 19648 - 21663 (-)
Type: TC
Location: 19648 - 21663 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_27784_21
Type: TC
Location: 21667 - 22623 (-)
Type: TC
Location: 21667 - 22623 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_27784_22
Type: TC
Location: 22781 - 24394 (-)
Type: TC
Location: 22781 - 24394 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_27784_23
Type: pfam
Location: 24759 - 26699 (-)
Type: pfam
Location: 24759 - 26699 (-)
Gene ID: MurphyR_2019_SRR7411400_bin.18_k141_27784_24
Type: TC
Location: 26706 - 28388 (-)
Type: TC
Location: 26706 - 28388 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.