Cluster: MurphyR_2019_SRR7411361_bin.7_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411361_bin.7
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7411361_bin.7_k141_7040 | MurphyR_2019_SRR7411361_bin.7_k141_7040_303 | 343772 | 345130 | - | 2.A.33.1.1 |
| pfam | MurphyR_2019_SRR7411361_bin.7_k141_7040 | MurphyR_2019_SRR7411361_bin.7_k141_7040_304 | 345398 | 346321 | - | DHH | DHHA2 |
| STP | MurphyR_2019_SRR7411361_bin.7_k141_7040 | MurphyR_2019_SRR7411361_bin.7_k141_7040_305 | 346488 | 347441 | - | Glucokinase |
| TC | MurphyR_2019_SRR7411361_bin.7_k141_7040 | MurphyR_2019_SRR7411361_bin.7_k141_7040_306 | 347683 | 348015 | - | 4.A.3.2.3 |
| TC | MurphyR_2019_SRR7411361_bin.7_k141_7040 | MurphyR_2019_SRR7411361_bin.7_k141_7040_307 | 348025 | 348327 | - | 4.A.3.2.9 |
| TC | MurphyR_2019_SRR7411361_bin.7_k141_7040 | MurphyR_2019_SRR7411361_bin.7_k141_7040_308 | 348491 | 349834 | - | 4.A.3.2.9 |
| CAZyme | MurphyR_2019_SRR7411361_bin.7_k141_7040 | MurphyR_2019_SRR7411361_bin.7_k141_7040_309 | 349955 | 351355 | - | GH1 |
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_7040_303
Type: TC
Location: 343772 - 345130 (-)
Type: TC
Location: 343772 - 345130 (-)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_7040_304
Type: pfam
Location: 345398 - 346321 (-)
Type: pfam
Location: 345398 - 346321 (-)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_7040_305
Type: STP
Location: 346488 - 347441 (-)
Type: STP
Location: 346488 - 347441 (-)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_7040_306
Type: TC
Location: 347683 - 348015 (-)
Type: TC
Location: 347683 - 348015 (-)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_7040_307
Type: TC
Location: 348025 - 348327 (-)
Type: TC
Location: 348025 - 348327 (-)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_7040_308
Type: TC
Location: 348491 - 349834 (-)
Type: TC
Location: 348491 - 349834 (-)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_7040_309
Type: CAZyme
Location: 349955 - 351355 (-)
Type: CAZyme
Location: 349955 - 351355 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MurphyR_2019_SRR7411361_bin.7_k141_7040_307 | vegan > omnivore | 1.00401 | 0.01287 |