Cluster: MurphyR_2019_SRR7411361_bin.7_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411361_bin.7
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7411361_bin.7_k141_18818 | MurphyR_2019_SRR7411361_bin.7_k141_18818_27 | 34016 | 35692 | + | 3.A.1.5.35 |
| TC | MurphyR_2019_SRR7411361_bin.7_k141_18818 | MurphyR_2019_SRR7411361_bin.7_k141_18818_28 | 35849 | 36886 | + | 3.A.1.5.37 |
| TC | MurphyR_2019_SRR7411361_bin.7_k141_18818 | MurphyR_2019_SRR7411361_bin.7_k141_18818_29 | 36901 | 37836 | + | 3.A.1.5.11 |
| TC | MurphyR_2019_SRR7411361_bin.7_k141_18818 | MurphyR_2019_SRR7411361_bin.7_k141_18818_30 | 37839 | 38930 | + | 3.A.1.5.34 |
| TC | MurphyR_2019_SRR7411361_bin.7_k141_18818 | MurphyR_2019_SRR7411361_bin.7_k141_18818_31 | 38930 | 39958 | + | 3.A.1.5.36 |
| STP | MurphyR_2019_SRR7411361_bin.7_k141_18818 | MurphyR_2019_SRR7411361_bin.7_k141_18818_32 | 40707 | 43052 | + | GAF | SpoIIE |
| STP | MurphyR_2019_SRR7411361_bin.7_k141_18818 | MurphyR_2019_SRR7411361_bin.7_k141_18818_33 | 43134 | 43880 | + | STAS |
| CAZyme | MurphyR_2019_SRR7411361_bin.7_k141_18818 | MurphyR_2019_SRR7411361_bin.7_k141_18818_34 | 44465 | 46198 | + | GH13_30 |
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_18818_27
Type: TC
Location: 34016 - 35692 (+)
Type: TC
Location: 34016 - 35692 (+)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_18818_28
Type: TC
Location: 35849 - 36886 (+)
Type: TC
Location: 35849 - 36886 (+)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_18818_29
Type: TC
Location: 36901 - 37836 (+)
Type: TC
Location: 36901 - 37836 (+)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_18818_30
Type: TC
Location: 37839 - 38930 (+)
Type: TC
Location: 37839 - 38930 (+)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_18818_31
Type: TC
Location: 38930 - 39958 (+)
Type: TC
Location: 38930 - 39958 (+)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_18818_32
Type: STP
Location: 40707 - 43052 (+)
Type: STP
Location: 40707 - 43052 (+)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_18818_33
Type: STP
Location: 43134 - 43880 (+)
Type: STP
Location: 43134 - 43880 (+)
Gene ID: MurphyR_2019_SRR7411361_bin.7_k141_18818_34
Type: CAZyme
Location: 44465 - 46198 (+)
Type: CAZyme
Location: 44465 - 46198 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.