Cluster: MurphyR_2019_SRR7411342_bin.7_CGC16
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: MurphyR_2019_SRR7411342_bin.7
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7411342_bin.7_k141_36294 | MurphyR_2019_SRR7411342_bin.7_k141_36294_18 | 16691 | 17614 | - | GT2 |
| NULL(UNKNOWN) | MurphyR_2019_SRR7411342_bin.7_k141_36294 | MurphyR_2019_SRR7411342_bin.7_k141_36294_19 | 17628 | 18122 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MurphyR_2019_SRR7411342_bin.7_k141_36294 | MurphyR_2019_SRR7411342_bin.7_k141_36294_20 | 18119 | 19222 | - | GT4 |
| pfam | MurphyR_2019_SRR7411342_bin.7_k141_36294 | MurphyR_2019_SRR7411342_bin.7_k141_36294_21 | 19470 | 20360 | - | ATPgrasp_TupA |
| CAZyme | MurphyR_2019_SRR7411342_bin.7_k141_36294 | MurphyR_2019_SRR7411342_bin.7_k141_36294_22 | 20357 | 20848 | - | GT1 |
| pfam | MurphyR_2019_SRR7411342_bin.7_k141_36294 | MurphyR_2019_SRR7411342_bin.7_k141_36294_23 | 20861 | 21334 | - | Alg14 |
| pfam | MurphyR_2019_SRR7411342_bin.7_k141_36294 | MurphyR_2019_SRR7411342_bin.7_k141_36294_24 | 21338 | 22597 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | MurphyR_2019_SRR7411342_bin.7_k141_36294 | MurphyR_2019_SRR7411342_bin.7_k141_36294_25 | 22636 | 23385 | - | 9.B.18.1.2 |
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_36294_18
Type: CAZyme
Location: 16691 - 17614 (-)
Type: CAZyme
Location: 16691 - 17614 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_36294_19
Type:
Location: 17628 - 18122 (-)
Type:
Location: 17628 - 18122 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_36294_20
Type: CAZyme
Location: 18119 - 19222 (-)
Type: CAZyme
Location: 18119 - 19222 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_36294_21
Type: pfam
Location: 19470 - 20360 (-)
Type: pfam
Location: 19470 - 20360 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_36294_22
Type: CAZyme
Location: 20357 - 20848 (-)
Type: CAZyme
Location: 20357 - 20848 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_36294_23
Type: pfam
Location: 20861 - 21334 (-)
Type: pfam
Location: 20861 - 21334 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_36294_24
Type: pfam
Location: 21338 - 22597 (-)
Type: pfam
Location: 21338 - 22597 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_36294_25
Type: TC
Location: 22636 - 23385 (-)
Type: TC
Location: 22636 - 23385 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900768435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.