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Cluster: MurphyR_2019_SRR7411342_bin.7_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7411342_bin.7_k141_35884 MurphyR_2019_SRR7411342_bin.7_k141_35884_304 340765 341238 + 4.A.6.1.18
TC MurphyR_2019_SRR7411342_bin.7_k141_35884 MurphyR_2019_SRR7411342_bin.7_k141_35884_305 341248 342033 + 4.A.6.1.13
TC MurphyR_2019_SRR7411342_bin.7_k141_35884 MurphyR_2019_SRR7411342_bin.7_k141_35884_306 342036 342869 + 4.A.6.1.13
pfam MurphyR_2019_SRR7411342_bin.7_k141_35884 MurphyR_2019_SRR7411342_bin.7_k141_35884_307 342896 343294 + EIIA-man
CAZyme MurphyR_2019_SRR7411342_bin.7_k141_35884 MurphyR_2019_SRR7411342_bin.7_k141_35884_308 343307 344431 + GH172
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_35884_304
Type: TC
Location: 340765 - 341238 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_35884_305
Type: TC
Location: 341248 - 342033 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_35884_306
Type: TC
Location: 342036 - 342869 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_35884_307
Type: pfam
Location: 342896 - 343294 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.7_k141_35884_308
Type: CAZyme
Location: 343307 - 344431 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7411342_bin.7_k141_35884_304 vegan > omnivore 1.04326 0.02101

🧭 Explore Read Mapping of CGC

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