Cluster: MurphyR_2019_SRR7411342_bin.1_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411342_bin.1
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7411342_bin.1_k141_16625 | MurphyR_2019_SRR7411342_bin.1_k141_16625_77 | 77424 | 80963 | - | 3.A.1.129.1 |
| TC | MurphyR_2019_SRR7411342_bin.1_k141_16625 | MurphyR_2019_SRR7411342_bin.1_k141_16625_78 | 81088 | 82107 | - | 3.D.4.3.2 |
| TC | MurphyR_2019_SRR7411342_bin.1_k141_16625 | MurphyR_2019_SRR7411342_bin.1_k141_16625_79 | 82098 | 83486 | - | 3.D.4.3.2 |
| TF | MurphyR_2019_SRR7411342_bin.1_k141_16625 | MurphyR_2019_SRR7411342_bin.1_k141_16625_80 | 83544 | 83996 | - | Rrf2 |
| TC | MurphyR_2019_SRR7411342_bin.1_k141_16625 | MurphyR_2019_SRR7411342_bin.1_k141_16625_81 | 84159 | 85166 | - | 2.A.20.1.5 |
| pfam | MurphyR_2019_SRR7411342_bin.1_k141_16625 | MurphyR_2019_SRR7411342_bin.1_k141_16625_82 | 85159 | 85788 | - | PhoU_div |
| pfam | MurphyR_2019_SRR7411342_bin.1_k141_16625 | MurphyR_2019_SRR7411342_bin.1_k141_16625_83 | 85867 | 86361 | - | MoCF_biosynth |
| CAZyme | MurphyR_2019_SRR7411342_bin.1_k141_16625 | MurphyR_2019_SRR7411342_bin.1_k141_16625_84 | 86370 | 87221 | - | CE4 |
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_16625_77
Type: TC
Location: 77424 - 80963 (-)
Type: TC
Location: 77424 - 80963 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_16625_78
Type: TC
Location: 81088 - 82107 (-)
Type: TC
Location: 81088 - 82107 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_16625_79
Type: TC
Location: 82098 - 83486 (-)
Type: TC
Location: 82098 - 83486 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_16625_80
Type: TF
Location: 83544 - 83996 (-)
Type: TF
Location: 83544 - 83996 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_16625_81
Type: TC
Location: 84159 - 85166 (-)
Type: TC
Location: 84159 - 85166 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_16625_82
Type: pfam
Location: 85159 - 85788 (-)
Type: pfam
Location: 85159 - 85788 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_16625_83
Type: pfam
Location: 85867 - 86361 (-)
Type: pfam
Location: 85867 - 86361 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_16625_84
Type: CAZyme
Location: 86370 - 87221 (-)
Type: CAZyme
Location: 86370 - 87221 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.