Cluster: MurphyR_2019_SRR7411342_bin.1_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411342_bin.1
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7411342_bin.1_k141_7571 | MurphyR_2019_SRR7411342_bin.1_k141_7571_6 | 2096 | 2806 | + | 1.C.82.1.1 |
| pfam | MurphyR_2019_SRR7411342_bin.1_k141_7571 | MurphyR_2019_SRR7411342_bin.1_k141_7571_7 | 2981 | 3487 | + | Ribosomal_L10 |
| pfam | MurphyR_2019_SRR7411342_bin.1_k141_7571 | MurphyR_2019_SRR7411342_bin.1_k141_7571_8 | 3558 | 3926 | + | Ribosomal_L12 | Ribosomal_L12_N |
| CAZyme | MurphyR_2019_SRR7411342_bin.1_k141_7571 | MurphyR_2019_SRR7411342_bin.1_k141_7571_9 | 4042 | 5520 | - | GT83 |
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_7571_6
Type: TC
Location: 2096 - 2806 (+)
Type: TC
Location: 2096 - 2806 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_7571_7
Type: pfam
Location: 2981 - 3487 (+)
Type: pfam
Location: 2981 - 3487 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_7571_8
Type: pfam
Location: 3558 - 3926 (+)
Type: pfam
Location: 3558 - 3926 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_7571_9
Type: CAZyme
Location: 4042 - 5520 (-)
Type: CAZyme
Location: 4042 - 5520 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.