Cluster: MurphyR_2019_SRR7411342_bin.1_CGC2
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411342_bin.1
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_158 | 158649 | 160367 | + | 3.D.10.1.4 |
| pfam | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_159 | 160369 | 161331 | + | Fer2_3 | Fer4_8 | Fer4_9 | Fer4_17 |
| TC | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_160 | 161331 | 162206 | + | 3.D.10.1.4 |
| NULL(UNKNOWN) | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_161 | 162375 | 163121 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_162 | 163308 | 163901 | + | 9.B.27.2.5 |
| CAZyme | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_163 | 163912 | 165549 | + | GT83 |
| STP | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_164 | 165795 | 166748 | + | SBP_bac_3 |
| TC | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_165 | 166758 | 167510 | + | 3.A.1.17.1 |
| TC | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_166 | 167522 | 168295 | + | 3.A.1.16.3 |
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_158
Type: TC
Location: 158649 - 160367 (+)
Type: TC
Location: 158649 - 160367 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_159
Type: pfam
Location: 160369 - 161331 (+)
Type: pfam
Location: 160369 - 161331 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_160
Type: TC
Location: 161331 - 162206 (+)
Type: TC
Location: 161331 - 162206 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_161
Type:
Location: 162375 - 163121 (+)
Type:
Location: 162375 - 163121 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_162
Type: TC
Location: 163308 - 163901 (+)
Type: TC
Location: 163308 - 163901 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_163
Type: CAZyme
Location: 163912 - 165549 (+)
Type: CAZyme
Location: 163912 - 165549 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_164
Type: STP
Location: 165795 - 166748 (+)
Type: STP
Location: 165795 - 166748 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_165
Type: TC
Location: 166758 - 167510 (+)
Type: TC
Location: 166758 - 167510 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_166
Type: TC
Location: 167522 - 168295 (+)
Type: TC
Location: 167522 - 168295 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.