Cluster: MurphyR_2019_SRR7411342_bin.1_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411342_bin.1
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_88 | 88967 | 89599 | + | 9.B.149.1.11 |
| pfam | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_89 | 89798 | 90031 | - | Fer2_BFD |
| CAZyme | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_90 | 90312 | 91460 | + | GH3 |
| pfam | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_91 | 91602 | 92753 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_92 | 92935 | 94479 | + | 2.A.49.3.3 |
| pfam | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_93 | 94979 | 96253 | + | Lar_N | LarA_C |
| TC | MurphyR_2019_SRR7411342_bin.1_k141_4783 | MurphyR_2019_SRR7411342_bin.1_k141_4783_94 | 96264 | 97061 | + | 2.A.102.4.9 |
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_88
Type: TC
Location: 88967 - 89599 (+)
Type: TC
Location: 88967 - 89599 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_89
Type: pfam
Location: 89798 - 90031 (-)
Type: pfam
Location: 89798 - 90031 (-)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_90
Type: CAZyme
Location: 90312 - 91460 (+)
Type: CAZyme
Location: 90312 - 91460 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_91
Type: pfam
Location: 91602 - 92753 (+)
Type: pfam
Location: 91602 - 92753 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_92
Type: TC
Location: 92935 - 94479 (+)
Type: TC
Location: 92935 - 94479 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_93
Type: pfam
Location: 94979 - 96253 (+)
Type: pfam
Location: 94979 - 96253 (+)
Gene ID: MurphyR_2019_SRR7411342_bin.1_k141_4783_94
Type: TC
Location: 96264 - 97061 (+)
Type: TC
Location: 96264 - 97061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.