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Cluster: MurphyR_2019_SRR7411330_bin.2_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7411330_bin.2_k141_3078 MurphyR_2019_SRR7411330_bin.2_k141_3078_8 9650 11332 - 8.A.7.1.2
TC MurphyR_2019_SRR7411330_bin.2_k141_3078 MurphyR_2019_SRR7411330_bin.2_k141_3078_9 11337 11603 - 8.A.8.1.2
TF MurphyR_2019_SRR7411330_bin.2_k141_3078 MurphyR_2019_SRR7411330_bin.2_k141_3078_10 11889 12914 + LacI
TC MurphyR_2019_SRR7411330_bin.2_k141_3078 MurphyR_2019_SRR7411330_bin.2_k141_3078_11 13062 15113 - 4.A.1.2.12
CAZyme MurphyR_2019_SRR7411330_bin.2_k141_3078 MurphyR_2019_SRR7411330_bin.2_k141_3078_12 15313 16779 - GH32
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_3078_8
Type: TC
Location: 9650 - 11332 (-)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_3078_9
Type: TC
Location: 11337 - 11603 (-)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_3078_10
Type: TF
Location: 11889 - 12914 (+)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_3078_11
Type: TC
Location: 13062 - 15113 (-)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_3078_12
Type: CAZyme
Location: 15313 - 16779 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7411330_bin.2_k141_3078_9 vegan > omnivore 1.47112 0.01856

🧭 Explore Read Mapping of CGC

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