Cluster: MurphyR_2019_SRR7411330_bin.2_CGC22
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411330_bin.2
- CGC Family ID: CGCFAM_00922
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7411330_bin.2_k141_11306 | MurphyR_2019_SRR7411330_bin.2_k141_11306_93 | 94750 | 94980 | + | 4.A.1.1.1 |
| TC | MurphyR_2019_SRR7411330_bin.2_k141_11306 | MurphyR_2019_SRR7411330_bin.2_k141_11306_94 | 94977 | 95450 | + | 4.A.1.2.6 |
| CAZyme | MurphyR_2019_SRR7411330_bin.2_k141_11306 | MurphyR_2019_SRR7411330_bin.2_k141_11306_95 | 95523 | 97673 | - | GH77 |
| pfam | MurphyR_2019_SRR7411330_bin.2_k141_11306 | MurphyR_2019_SRR7411330_bin.2_k141_11306_96 | 97715 | 97999 | - | PTS_EIIB |
| TC | MurphyR_2019_SRR7411330_bin.2_k141_11306 | MurphyR_2019_SRR7411330_bin.2_k141_11306_97 | 98269 | 99951 | - | 3.A.1.120.6 |
| pfam | MurphyR_2019_SRR7411330_bin.2_k141_11306 | MurphyR_2019_SRR7411330_bin.2_k141_11306_98 | 100270 | 101154 | + | BPL_C | BPL_LplA_LipB | BPL_LplA_LipB_2 |
| sulfatase | MurphyR_2019_SRR7411330_bin.2_k141_11306 | MurphyR_2019_SRR7411330_bin.2_k141_11306_99 | 101141 | 102934 | + | S1_37 |
| TC | MurphyR_2019_SRR7411330_bin.2_k141_11306 | MurphyR_2019_SRR7411330_bin.2_k141_11306_100 | 102931 | 104487 | + | 3.B.1.1.5 |
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_11306_93
Type: TC
Location: 94750 - 94980 (+)
Type: TC
Location: 94750 - 94980 (+)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_11306_94
Type: TC
Location: 94977 - 95450 (+)
Type: TC
Location: 94977 - 95450 (+)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_11306_95
Type: CAZyme
Location: 95523 - 97673 (-)
Type: CAZyme
Location: 95523 - 97673 (-)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_11306_96
Type: pfam
Location: 97715 - 97999 (-)
Type: pfam
Location: 97715 - 97999 (-)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_11306_97
Type: TC
Location: 98269 - 99951 (-)
Type: TC
Location: 98269 - 99951 (-)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_11306_98
Type: pfam
Location: 100270 - 101154 (+)
Type: pfam
Location: 100270 - 101154 (+)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_11306_99
Type: sulfatase
Location: 101141 - 102934 (+)
Type: sulfatase
Location: 101141 - 102934 (+)
Gene ID: MurphyR_2019_SRR7411330_bin.2_k141_11306_100
Type: TC
Location: 102931 - 104487 (+)
Type: TC
Location: 102931 - 104487 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp927911615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.