Cluster: MurphyR_2019_SRR7411286_bin.10_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411286_bin.10
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7411286_bin.10_k141_6083 | MurphyR_2019_SRR7411286_bin.10_k141_6083_28 | 35652 | 37328 | + | 3.A.1.5.35 |
| TC | MurphyR_2019_SRR7411286_bin.10_k141_6083 | MurphyR_2019_SRR7411286_bin.10_k141_6083_29 | 37485 | 38522 | + | 3.A.1.5.37 |
| TC | MurphyR_2019_SRR7411286_bin.10_k141_6083 | MurphyR_2019_SRR7411286_bin.10_k141_6083_30 | 38537 | 39472 | + | 3.A.1.5.11 |
| TC | MurphyR_2019_SRR7411286_bin.10_k141_6083 | MurphyR_2019_SRR7411286_bin.10_k141_6083_31 | 39475 | 40566 | + | 3.A.1.5.34 |
| TC | MurphyR_2019_SRR7411286_bin.10_k141_6083 | MurphyR_2019_SRR7411286_bin.10_k141_6083_32 | 40566 | 41594 | + | 3.A.1.5.36 |
| STP | MurphyR_2019_SRR7411286_bin.10_k141_6083 | MurphyR_2019_SRR7411286_bin.10_k141_6083_33 | 42338 | 44683 | + | GAF | SpoIIE |
| STP | MurphyR_2019_SRR7411286_bin.10_k141_6083 | MurphyR_2019_SRR7411286_bin.10_k141_6083_34 | 44762 | 45508 | + | STAS |
| CAZyme | MurphyR_2019_SRR7411286_bin.10_k141_6083 | MurphyR_2019_SRR7411286_bin.10_k141_6083_35 | 46094 | 47827 | + | GH13_30 |
Gene ID: MurphyR_2019_SRR7411286_bin.10_k141_6083_28
Type: TC
Location: 35652 - 37328 (+)
Type: TC
Location: 35652 - 37328 (+)
Gene ID: MurphyR_2019_SRR7411286_bin.10_k141_6083_29
Type: TC
Location: 37485 - 38522 (+)
Type: TC
Location: 37485 - 38522 (+)
Gene ID: MurphyR_2019_SRR7411286_bin.10_k141_6083_30
Type: TC
Location: 38537 - 39472 (+)
Type: TC
Location: 38537 - 39472 (+)
Gene ID: MurphyR_2019_SRR7411286_bin.10_k141_6083_31
Type: TC
Location: 39475 - 40566 (+)
Type: TC
Location: 39475 - 40566 (+)
Gene ID: MurphyR_2019_SRR7411286_bin.10_k141_6083_32
Type: TC
Location: 40566 - 41594 (+)
Type: TC
Location: 40566 - 41594 (+)
Gene ID: MurphyR_2019_SRR7411286_bin.10_k141_6083_33
Type: STP
Location: 42338 - 44683 (+)
Type: STP
Location: 42338 - 44683 (+)
Gene ID: MurphyR_2019_SRR7411286_bin.10_k141_6083_34
Type: STP
Location: 44762 - 45508 (+)
Type: STP
Location: 44762 - 45508 (+)
Gene ID: MurphyR_2019_SRR7411286_bin.10_k141_6083_35
Type: CAZyme
Location: 46094 - 47827 (+)
Type: CAZyme
Location: 46094 - 47827 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp937982065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.