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Cluster: MurphyR_2019_SRR7411277_bin.4_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_1 3 1916 - GH25
CAZyme MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_2 2062 3114 - GT113
pfam MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_3 3125 4117 - Stealth_CR2 | Stealth_CR1
STP MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_4 4114 5214 - Pyr_redox
TC MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_5 5225 6640 - 2.A.66.2.16
NULL(UNKNOWN) MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_6 6690 7865 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_7 7944 8933 - GT2
CAZyme MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_8 8951 9925 - GT2
pfam MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_9 10452 11420 - DUF6625
pfam MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_10 11417 12058 - DUF1919
CAZyme MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_11 12060 13208 - GT4
CAZyme MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_12 13211 14383 - GT4
TC MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_13 14422 15798 - 9.B.18.1.2
TC MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_14 15818 16510 - 8.A.3.2.2
TC MurphyR_2019_SRR7411277_bin.4_k141_1119 MurphyR_2019_SRR7411277_bin.4_k141_1119_15 16523 17218 - 8.A.3.2.3
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_1
Type: CAZyme
Location: 3 - 1916 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_2
Type: CAZyme
Location: 2062 - 3114 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_3
Type: pfam
Location: 3125 - 4117 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_4
Type: STP
Location: 4114 - 5214 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_5
Type: TC
Location: 5225 - 6640 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_6
Type:
Location: 6690 - 7865 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_7
Type: CAZyme
Location: 7944 - 8933 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_8
Type: CAZyme
Location: 8951 - 9925 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_9
Type: pfam
Location: 10452 - 11420 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_10
Type: pfam
Location: 11417 - 12058 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_11
Type: CAZyme
Location: 12060 - 13208 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_12
Type: CAZyme
Location: 13211 - 14383 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_13
Type: TC
Location: 14422 - 15798 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_14
Type: TC
Location: 15818 - 16510 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_1119_15
Type: TC
Location: 16523 - 17218 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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