dbCAN HGM

Cluster: MurphyR_2019_SRR7411277_bin.4_CGC25

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	MurphyR_2019_SRR7411277_bin.4_k141_4612	MurphyR_2019_SRR7411277_bin.4_k141_4612_3	2552	3586	+	GT4
CAZyme	MurphyR_2019_SRR7411277_bin.4_k141_4612	MurphyR_2019_SRR7411277_bin.4_k141_4612_4	3588	4910	+	GT4
pfam	MurphyR_2019_SRR7411277_bin.4_k141_4612	MurphyR_2019_SRR7411277_bin.4_k141_4612_5	5238	7181	+	tRNA-synt_2b \| TGS \| HGTP_anticodon \| tRNA_SAD
TC	MurphyR_2019_SRR7411277_bin.4_k141_4612	MurphyR_2019_SRR7411277_bin.4_k141_4612_6	7392	8441	-	9.B.145.1.2
TF	MurphyR_2019_SRR7411277_bin.4_k141_4612	MurphyR_2019_SRR7411277_bin.4_k141_4612_7	9325	10026	+	Trans_reg_C
TC	MurphyR_2019_SRR7411277_bin.4_k141_4612	MurphyR_2019_SRR7411277_bin.4_k141_4612_8	10019	11371	+	2.A.21.9.1

Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4612_3
Type: CAZyme
Location: 2552 - 3586 (+)

Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4612_4
Type: CAZyme
Location: 3588 - 4910 (+)

Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4612_5
Type: pfam
Location: 5238 - 7181 (+)

Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4612_6
Type: TC
Location: 7392 - 8441 (-)

Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4612_7
Type: TF
Location: 9325 - 10026 (+)

Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4612_8
Type: TC
Location: 10019 - 11371 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
MurphyR_2019_SRR7411277_bin.4_k141_4612_6	vegan > omnivore	1.55421	0.00736
MurphyR_2019_SRR7411277_bin.4_k141_4612_6	vegetarian > omnivore	2.70691	0.00433