Cluster: MurphyR_2019_SRR7411277_bin.4_CGC22
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7411277_bin.4
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_36 | 34199 | 35368 | + | 2.A.1.17.3 |
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_37 | 35459 | 36610 | - | CBM50 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_38 | 37183 | 37806 | - | 3.A.2.2.2 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_39 | 37810 | 39195 | - | 3.A.2.2.2 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_40 | 39182 | 40972 | - | 3.A.2.2.2 |
| pfam | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_41 | 41006 | 41710 | - | Acetyltransf_1 | Acetyltransf_3 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_42 | 41707 | 42027 | - | 3.A.2.2.2 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_43 | 42008 | 43027 | - | 3.A.2.2.2 |
| NULL(UNKNOWN) | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_44 | 43037 | 43627 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_45 | 43698 | 44177 | - | 3.A.2.2.2 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_4605 | MurphyR_2019_SRR7411277_bin.4_k141_4605_46 | 44201 | 46162 | - | 3.A.2.2.2 |
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_36
Type: TC
Location: 34199 - 35368 (+)
Type: TC
Location: 34199 - 35368 (+)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_37
Type: CAZyme
Location: 35459 - 36610 (-)
Type: CAZyme
Location: 35459 - 36610 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_38
Type: TC
Location: 37183 - 37806 (-)
Type: TC
Location: 37183 - 37806 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_39
Type: TC
Location: 37810 - 39195 (-)
Type: TC
Location: 37810 - 39195 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_40
Type: TC
Location: 39182 - 40972 (-)
Type: TC
Location: 39182 - 40972 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_41
Type: pfam
Location: 41006 - 41710 (-)
Type: pfam
Location: 41006 - 41710 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_42
Type: TC
Location: 41707 - 42027 (-)
Type: TC
Location: 41707 - 42027 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_43
Type: TC
Location: 42008 - 43027 (-)
Type: TC
Location: 42008 - 43027 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_44
Type:
Location: 43037 - 43627 (-)
Type:
Location: 43037 - 43627 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_45
Type: TC
Location: 43698 - 44177 (-)
Type: TC
Location: 43698 - 44177 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_4605_46
Type: TC
Location: 44201 - 46162 (-)
Type: TC
Location: 44201 - 46162 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MurphyR_2019_SRR7411277_bin.4_k141_4605_38 | vegan > omnivore | 2.24922 | 0.00736 |
| MurphyR_2019_SRR7411277_bin.4_k141_4605_41 | vegan > omnivore | 3.08721 | 0.00736 |
| MurphyR_2019_SRR7411277_bin.4_k141_4605_41 | vegetarian > omnivore | 3.20648 | 0.00433 |