Cluster: MurphyR_2019_SRR7411277_bin.4_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MurphyR_2019_SRR7411277_bin.4
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3965 | MurphyR_2019_SRR7411277_bin.4_k141_3965_2 | 1355 | 2359 | + | GT113 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_3965 | MurphyR_2019_SRR7411277_bin.4_k141_3965_3 | 2583 | 3800 | + | 3.A.5.10.1 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_3965 | MurphyR_2019_SRR7411277_bin.4_k141_3965_4 | 3809 | 5398 | + | 3.A.5.10.1 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_3965 | MurphyR_2019_SRR7411277_bin.4_k141_3965_5 | 5391 | 6935 | + | 3.A.5.10.1 |
| pfam | MurphyR_2019_SRR7411277_bin.4_k141_3965 | MurphyR_2019_SRR7411277_bin.4_k141_3965_6 | 6932 | 7402 | + | Sec-ASP3 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_3965 | MurphyR_2019_SRR7411277_bin.4_k141_3965_7 | 7434 | 9812 | + | 3.A.5.10.1 |
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3965 | MurphyR_2019_SRR7411277_bin.4_k141_3965_8 | 9824 | 11338 | + | GT4 |
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3965_2
Type: CAZyme
Location: 1355 - 2359 (+)
Type: CAZyme
Location: 1355 - 2359 (+)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3965_3
Type: TC
Location: 2583 - 3800 (+)
Type: TC
Location: 2583 - 3800 (+)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3965_4
Type: TC
Location: 3809 - 5398 (+)
Type: TC
Location: 3809 - 5398 (+)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3965_5
Type: TC
Location: 5391 - 6935 (+)
Type: TC
Location: 5391 - 6935 (+)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3965_6
Type: pfam
Location: 6932 - 7402 (+)
Type: pfam
Location: 6932 - 7402 (+)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3965_7
Type: TC
Location: 7434 - 9812 (+)
Type: TC
Location: 7434 - 9812 (+)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3965_8
Type: CAZyme
Location: 9824 - 11338 (+)
Type: CAZyme
Location: 9824 - 11338 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.