Cluster: MurphyR_2019_SRR7411277_bin.4_CGC13
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: MurphyR_2019_SRR7411277_bin.4
- CGC Family ID: CGCFAM_00003
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_9 | 8668 | 10017 | - | GT2 |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_10 | 10030 | 11253 | - | 3.A.1.103.5 |
| pfam | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_11 | 11253 | 12059 | - | ABC2_membrane |
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_12 | 12059 | 13000 | - | GT2 |
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_13 | 12997 | 14145 | - | GT4 |
| pfam | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_14 | 14251 | 15102 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_15 | 15167 | 16093 | - | GT2 |
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_16 | 16150 | 17124 | - | GT2 |
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_17 | 17224 | 18006 | - | GT2 |
| NULL(UNKNOWN) | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_18 | 17990 | 19267 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_19 | 19257 | 19592 | - | DUF2304 |
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_20 | 19594 | 20304 | - | GT2 |
| pfam | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_21 | 20432 | 21412 | + | GFO_IDH_MocA |
| TC | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_22 | 21409 | 22494 | + | 1.I.1.1.3 |
| CAZyme | MurphyR_2019_SRR7411277_bin.4_k141_3738 | MurphyR_2019_SRR7411277_bin.4_k141_3738_23 | 22537 | 23919 | - | CE4 |
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_9
Type: CAZyme
Location: 8668 - 10017 (-)
Type: CAZyme
Location: 8668 - 10017 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_10
Type: TC
Location: 10030 - 11253 (-)
Type: TC
Location: 10030 - 11253 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_11
Type: pfam
Location: 11253 - 12059 (-)
Type: pfam
Location: 11253 - 12059 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_12
Type: CAZyme
Location: 12059 - 13000 (-)
Type: CAZyme
Location: 12059 - 13000 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_13
Type: CAZyme
Location: 12997 - 14145 (-)
Type: CAZyme
Location: 12997 - 14145 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_14
Type: pfam
Location: 14251 - 15102 (-)
Type: pfam
Location: 14251 - 15102 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_15
Type: CAZyme
Location: 15167 - 16093 (-)
Type: CAZyme
Location: 15167 - 16093 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_16
Type: CAZyme
Location: 16150 - 17124 (-)
Type: CAZyme
Location: 16150 - 17124 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_17
Type: CAZyme
Location: 17224 - 18006 (-)
Type: CAZyme
Location: 17224 - 18006 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_18
Type:
Location: 17990 - 19267 (-)
Type:
Location: 17990 - 19267 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_19
Type: pfam
Location: 19257 - 19592 (-)
Type: pfam
Location: 19257 - 19592 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_20
Type: CAZyme
Location: 19594 - 20304 (-)
Type: CAZyme
Location: 19594 - 20304 (-)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_21
Type: pfam
Location: 20432 - 21412 (+)
Type: pfam
Location: 20432 - 21412 (+)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_22
Type: TC
Location: 21409 - 22494 (+)
Type: TC
Location: 21409 - 22494 (+)
Gene ID: MurphyR_2019_SRR7411277_bin.4_k141_3738_23
Type: CAZyme
Location: 22537 - 23919 (-)
Type: CAZyme
Location: 22537 - 23919 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.